[Fri Aug 26 17:24:06 2016] >Input file: TMQ6IEE7M1D.pdb >TM segments: 590-603_ 605-620 MAIDEN score = 1.5118 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I593 -H616 0.70319863385202 I593 -S615 0.605170969175792 V601 -L606 0.505268707472403 T594 -S614 0.4000860833749 K590 -Q595 0.396778647727328 A598 -S607 0.319934564316687 T594 -T617 0.269600158141708 S592 -P610 0.238719371639244 T594 -P612 0.238237740298828 V591 -G613 0.210905005658119 Q597 -P610 0.210030628311058 V591 -L619 0.209999783721019 P610 -S615 0.209503851270617 Q595 -P610 0.204429933356936 Q595 -P612 0.19077613512665 V600 -S607 0.188193230817183 K590 -L619 0.184042909775661 L608 -G613 0.177094616702094 A598 -G613 0.161636831452177 A598 -S603 0.154459216979777 Q599 -L606 0.153160775177864 R609 -S614 0.150483490024636 V600 -L606 0.120722220271919 Q595 -L619 0.11776149784859 S592 -T617 0.116723915771402 S592 -A620 0.114388363596481 Q595 -S615 0.113260249890765 S614 -L619 0.112688819067317 I593 -S614 0.110961055711403 S607 -S614 0.10839183637281 S592 -L619 0.105519229257893 S615 -A620 0.10363295524106 T594 -S607 0.103258208693196 S607 -G613 0.103182883794041 S614 -A620 0.102702518691315 A602 -L608 0.0984857766114082 V591 -S614 0.0965305539527384 L596 -V601 0.0881335954314644 V591 -L596 0.0859756610291282 A598 -A605 0.0854465826315893 Q597 -S614 0.0787621665144957 A598 -L608 0.0784273437147487 I593 -P610 0.0747623805402948 Q597 -S611 0.0732945293468008 Q597 -R609 0.0706821849000933 T594 -R609 0.06929230082546 Q595 -R609 0.0682104398835789 V601 -S607 0.067933143669622 Q595 -V600 0.0679145303082733 I593 -G613 0.0667816315283196 L596 -S614 0.0635538860878109 S592 -S615 0.0543618717127408 S592 -Q597 0.0449230242174146 T594 -Q599 0.0407042448000996 V591 -S615 0.0396964518002321 S592 -S611 0.0348579893665075 A605 -P610 0.0257676097849115 Q595 -S607 0.0232661256034079 S592 -S614 0.0190293612802415 T594 -P610 0.0180614787700994 A602 -S607 0.0130609136702695 V591 -T617 0.00582483522695476 Q595 -S611 0.00528639422665256 V591 -A620 0.00367844307187326 T594 -I618 0.000776888829500777 T594 -L606 0.000760431291677577 L606 -G613 0.000428998447270401 Q595 -V601 -0.00206273349801456 L596 -P612 -0.00351910847867209 L596 -P610 -0.00375935340281153 L596 -G613 -0.00661726501769389 Q597 -A602 -0.0115795196342077 Q599 -A605 -0.0116624357261936 V601 -L608 -0.0132973474811111 Q599 -S607 -0.0149440680272619 G613 -L619 -0.0154587352530942 I593 -A620 -0.016420909604495 V591 -S611 -0.0240828420349564 L606 -S611 -0.0281563673612943 Q597 -L606 -0.0321871790253363 Q597 -G613 -0.0323281789071794 Q595 -T617 -0.033062977305254 L606 -P612 -0.0435008665482322 V600 -L608 -0.0466046053752214 A598 -P610 -0.0483536676483145 S603 -R609 -0.0518354337063368 K590 -H616 -0.0524076314595883 K590 -G613 -0.0632131191184624 Q595 -L606 -0.0637412420079695 V601 -P610 -0.0732901419474354 S592 -H616 -0.0737356791003285 Q597 -L608 -0.0744088729494976 Q597 -P612 -0.0754760953107128 V591 -P612 -0.0772890765142851 T594 -H616 -0.0800067336304195 T594 -L608 -0.08091611531253 S611 -H616 -0.0833981843728546 Q597 -A605 -0.0847444092666403 I593 -P612 -0.0873115055645655 G613 -I618 -0.0898001935692632 T594 -L619 -0.0907240355042109 Q597 -S607 -0.0964096380142641 L608 -S614 -0.101355088526632 S592 -I618 -0.102837972283278 Q595 -I618 -0.115294227688623 V601 -R609 -0.116892736812806 I593 -R609 -0.121054653639316 P612 -T617 -0.124481248551327 I593 -I618 -0.128497372257931 V591 -H616 -0.132190483385927 K590 -A620 -0.137975370994027 L596 -S607 -0.145733005394716 L596 -L606 -0.155082731099839 Q595 -S614 -0.166173191842023 K590 -L596 -0.171807675617123 A598 -L606 -0.184476181833934 S603 -L608 -0.184644733591598 Q595 -H616 -0.188133753470689 V591 -I618 -0.209617827325141 T594 -G613 -0.214074788113331 L596 -H616 -0.224593114839995 T594 -S615 -0.22922271569275 S592 -G613 -0.238443333563848 T594 -S611 -0.240436392504119 I593 -T617 -0.266791448294391 S592 -P612 -0.289041888165964 S607 -P612 -0.298935892429298 Q595 -G613 -0.313022443571159 V600 -A605 -0.320554582027672 I593 -S611 -0.352544550885289 I593 -L619 -0.407521436963888