[Mon Aug 29 17:23:21 2016] >Input file: TMQ6IP19M1G.pdb >TM segments: 76-107_ 109-124 MAIDEN score = -12.5211 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F94 -I99 1.15710084085278 R107 -P112 0.94086016539104 V96 -I101 0.836661692599799 L95 -S100 0.578883779514408 A119 -Q124 0.318787043085271 V96 -S105 0.316279828354805 A93 -I99 0.285137878700813 F94 -S100 0.268849249507863 S105 -Y110 0.254893246087123 L91 -G97 0.238773714572043 V96 -V103 0.220015001949291 R107 -M116 0.206601334222918 S105 -P112 0.173074589037044 L95 -C102 0.169427139080207 M116 -Q124 0.16807148506452 A88 -G97 0.161636831452177 G104 -A114 0.161636831452177 G86 -A93 0.148465609058262 L98 -S105 0.146712108403347 A93 -R106 0.142696938195055 A87 -I92 0.141927613433346 I90 -L98 0.141772222088728 L95 -G104 0.138020125827873 R111 -A119 0.136302379947008 I92 -I101 0.133628650481054 I90 -I101 0.126927273878659 I90 -G97 0.123439057041145 I99 -G104 0.12273413684282 Y110 -A119 0.118722601026405 L91 -L98 0.111901073557253 L95 -S105 0.107899273431581 V113 -V121 0.10712620757826 A93 -G104 0.106425951654382 I92 -V103 0.100103588643144 L82 -I92 0.0938017842234385 L82 -L91 0.0909387416815708 F94 -S105 0.0908206670445511 M116 -L123 0.0888873282074862 G85 -A93 0.0875884405496956 V115 -Q124 0.0764551676672438 L98 -V103 0.0737776523422345 Y110 -V122 0.0716978240245316 V96 -R107 0.0664183552550641 I77 -L82 0.0656029019621624 V113 -V122 0.0653097472626474 V113 -A120 0.0646948649627603 A114 -V121 0.0643832842576764 A93 -S105 0.0634932754563309 I99 -S105 0.0602141369657221 I77 -G85 0.0588796098616546 I90 -V103 0.058377618007821 R106 -F118 0.0557457942966941 V96 -C102 0.0554571271944333 V103 -R111 0.0548823483938938 R106 -V113 0.0543594404443279 R107 -F118 0.0534429479278984 R107 -A119 0.0516386129326265 A81 -L91 0.0482196009017493 V103 -Y110 0.0478571985125722 L95 -I101 0.0461508163115192 I92 -C102 0.0438625501949472 F109 -A119 0.0417345768927868 S100 -S105 0.0360991527818206 A87 -L95 0.0351072798016125 F118 -L123 0.0341968523280238 L91 -I101 0.0270508085324321 L83 -I92 0.0268563057371249 L91 -V103 0.0261968528844843 I89 -V96 0.0248567797871591 T79 -G86 0.0223036178261282 I89 -R106 0.0219005780142414 C102 -Y110 0.0216078084833102 I99 -R106 0.0206001572337302 S105 -A114 0.0184937206082072 L83 -L91 0.0152634692939877 S105 -V115 0.0149114759685127 F109 -V115 0.0148033667248492 R107 -V115 0.0137588106292839 G97 -R106 0.0115747013504492 G85 -L95 0.0107493282033722 F109 -M116 0.0101029803840138 G104 -Y110 0.00893265716760183 V96 -R106 0.00182491125489026 R106 -R111 0.000212729078834961 A87 -V96 -0.000218033960262431 A88 -V96 -0.00344565669336294 A78 -G86 -0.00381700506923544 C102 -F109 -0.00543225055387131 Q76 -L84 -0.00615353765512605 A93 -C102 -0.00720763831937976 I92 -R106 -0.00804131260733332 S100 -R106 -0.0087562685861311 A81 -I89 -0.01274398448464 I92 -F109 -0.0137596528383472 G86 -F94 -0.0178881841455434 I89 -I101 -0.0185595709247686 R106 -A114 -0.0200457334008135 A114 -V122 -0.0207555278074778 T79 -A88 -0.0210729891746091 G86 -L95 -0.0225161818257478 Q76 -G85 -0.0257624867695652 I92 -S100 -0.0297419087173107 L98 -G104 -0.0316671895189646 F109 -L117 -0.0323132961316706 L82 -A87 -0.0336702319856261 R111 -M116 -0.0341092697654388 V96 -F109 -0.0358775738979498 F94 -V103 -0.0404669614747371 G104 -F109 -0.0416101114729939 A78 -A87 -0.0430038294627946 V103 -V115 -0.0438312244946455 I89 -S100 -0.0438717151273398 Q76 -L83 -0.0455890459530375 R111 -A120 -0.0458665956131679 V96 -G104 -0.0462345595864475 L95 -V103 -0.0463305165800909 P112 -A120 -0.0466054782696687 I77 -L84 -0.0476080640676226 I101 -R107 -0.049907715490795 Q76 -A81 -0.0500966248280001 I77 -G86 -0.0538299763377044 V96 -Y110 -0.0542332803765153 V115 -L123 -0.0553886685251133 R106 -L117 -0.0562403861951272 A81 -I90 -0.0563779186470548 G104 -P112 -0.0564727477108562 L95 -F109 -0.0586328258425635 P112 -L117 -0.0611932312191712 V103 -P112 -0.0617658940740118 L117 -Q124 -0.065871475304688 Y110 -V115 -0.0664000744469906 F94 -G104 -0.0670798480598669 S105 -V113 -0.0683359584123808 I89 -V103 -0.0712866787132427 A78 -G85 -0.0725195668449933 L80 -I89 -0.0733295988416742 L84 -I92 -0.0740513328857659 G97 -F109 -0.0740729742259836 P112 -V121 -0.0744719456576842 L80 -A88 -0.0757910411520863 Y110 -V121 -0.0764323973055943 P112 -V122 -0.0766784203069822 R106 -M116 -0.077494826900633 G104 -V115 -0.0809030813359506 L83 -I90 -0.0825118740217876 G85 -F94 -0.0826334725107083 S105 -R111 -0.0832726433546256 F109 -F118 -0.0863278626302577 I92 -S105 -0.0878760328420563 I92 -L98 -0.0880881868993529 L95 -R106 -0.0928758333864135 Y110 -A120 -0.0944806960221101 G85 -I90 -0.0956746795171579 I92 -G97 -0.0981436726758336 L117 -L123 -0.0986660500166305 T79 -A87 -0.0989701899514792 L80 -G86 -0.0996671614524303 I101 -F109 -0.104907717268815 F94 -C102 -0.105801388549207 G97 -G104 -0.10605394438867 V115 -V122 -0.107460825212309 G86 -L91 -0.107845197205888 I89 -G97 -0.109860073594199 L80 -A87 -0.111860243979057 R111 -F118 -0.1127892424135 Y110 -M116 -0.116316499822421 I92 -G104 -0.117657830393254 G97 -R107 -0.119150604378023 A88 -S100 -0.125957724386082 F94 -R106 -0.126598049935641 G97 -S105 -0.12892973094529 R106 -P112 -0.1338770277854 R107 -L117 -0.139287065561904 Y110 -F118 -0.139529101024026 A78 -L83 -0.140963394699334 P112 -A119 -0.141458983337117 I89 -F94 -0.146469208878759 R106 -V115 -0.153058052882589 L84 -A93 -0.154034182324094 F118 -Q124 -0.15717497948989 I89 -I99 -0.157724805693481 R107 -V113 -0.158835255439763 I90 -V96 -0.160906544441052 L82 -I90 -0.163724069609839 A87 -F94 -0.166093442167579 A88 -L95 -0.170094924660942 A93 -S100 -0.172949366663677 G104 -R111 -0.179149611704113 A93 -I101 -0.181473984657433 I90 -I99 -0.18593442846243 L91 -I99 -0.188929605848503 G85 -I92 -0.19032779454203 A81 -A88 -0.19537966309093 A88 -F94 -0.196194172780567 G97 -V103 -0.197575280299259 A114 -A120 -0.202136042700931 G97 -C102 -0.204663449742376 I90 -S100 -0.206697995179375 R107 -A114 -0.20915343284827 P112 -F118 -0.210220179285627 M116 -V121 -0.211469399564505 G85 -L91 -0.213555401169594 A87 -A93 -0.224346052362838 G86 -I92 -0.227763850640541 I92 -I99 -0.227869933903908 T79 -G85 -0.239500182887413 Y110 -L117 -0.242622243534985 A81 -A87 -0.24404367287002 L84 -I89 -0.252933455883092 L82 -A88 -0.255378542970515 L117 -V122 -0.260160359936217 V115 -V121 -0.267951724184003 V113 -F118 -0.270163837927505 F94 -I101 -0.272656974266023 L83 -A88 -0.276797846597215 A88 -A93 -0.280755773361333 R111 -L117 -0.280970770855797 L91 -S100 -0.290370971132228 I90 -L95 -0.297581597568492 I77 -L83 -0.307435975994434 A93 -L98 -0.308671035896072 L82 -I89 -0.315912298594922 A78 -L84 -0.31656755210337 T79 -L84 -0.324197989042675 M116 -V122 -0.324550693015633 F109 -A114 -0.327953894162027 A93 -V103 -0.32829908272838 L84 -L91 -0.330811849890818 V103 -F109 -0.334971453134714 V113 -A119 -0.341101820741839 I89 -L95 -0.355969927162542 C102 -R107 -0.35732906509139 L84 -I90 -0.361783607942468 L91 -V96 -0.387040199613721 I101 -R106 -0.407394731239935 A114 -A119 -0.415710016530487 L83 -I89 -0.418242850833233 L80 -G85 -0.42061520017153 V115 -A120 -0.448188248001063 A81 -G86 -0.473866479317407 Q76 -L82 -0.493361683328858