[Fri Aug 26 17:29:40 2016] >Input file: TMQ6MT15M1D.pdb >TM segments: 51-61 MAIDEN score = -0.4356 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L51 -T56 0.370673765417488 A52 -Y58 0.130849084090312 H54 -L60 0.0064432486940964 L51 -S57 -0.0539717383905316 N55 -L60 -0.0669940917752232 H54 -N59 -0.122140185787762 K53 -Y58 -0.14762856296407 K53 -N59 -0.163220469050137 A52 -S57 -0.192534582069987 L51 -Y58 -0.197052551570907