[Mon Aug 29 17:27:03 2016] >Input file: TMQ6MT60M1G.pdb >TM segments: 133-148_ 151-157_ 192-199 MAIDEN score = 8.5835 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E134 -L142 1.54795209359896 D136 -V145 0.960796334282803 E134 -D141 0.875959425490819 E134 -Y144 0.760030783048394 F137 -V145 0.733394561502279 F137 -P146 0.695419820789526 K138 -V145 0.691410489715039 G140 -V145 0.572367492272139 F133 -L142 0.543868734720744 N147 -W154 0.488133730818821 K138 -K148 0.48745985329629 S135 -Y144 0.450638527681952 K138 -P146 0.415817438674474 F133 -D141 0.37424243810406 E134 -V145 0.335457948671859 S135 -G140 0.311784802944951 P146 -N157 0.305884785304432 S135 -V145 0.291279552804382 F137 -N147 0.28157377274721 F133 -Y144 0.276644999512191 E134 -Q156 0.263696605739238 D136 -Y143 0.259452145409658 V145 -W154 0.258858706268946 S135 -Y143 0.257592452865467 S135 -P146 0.241589568261728 S135 -L142 0.238830557235221 K138 -Y143 0.223605271179227 G140 -N147 0.20526656961557 D136 -N147 0.196770942856812 P146 -Q156 0.183097353055504 F133 -N157 0.179144791305792 K148 -L155 0.167367927199726 Y144 -W154 0.166752915745344 D136 -Y144 0.153476031195226 S135 -N147 0.1297093788666 D136 -D141 0.127897451944134 E134 -N147 0.126005360312321 N147 -N157 0.120539343746568 K148 -W154 0.110777210342016 S135 -K148 0.100488520580945 P146 -L155 0.0961470400456581 V145 -L155 0.095665862560776 V145 -Y151 0.0769043321553395 F133 -Y143 0.0697397052310267 Y143 -Q156 0.0676395029906169 E134 -W154 0.0425383081372383 D136 -P146 0.0389088663106527 F133 -Q156 0.0352819862194809 Y144 -T153 0.0305276357560058 Y144 -N157 0.0229037852208146 F139 -K148 0.0175548329738229 F133 -V145 0.0166505812613675 F133 -P146 0.00885249271741895 D141 -N147 -0.00107824250602562 F137 -K148 -0.00135743489173468 F137 -L142 -0.0063615772755643 F139 -V145 -0.00702228623109313 E134 -F139 -0.00800643509793186 Y144 -L155 -0.0141812653617812 S193 -I198 -0.0277738185942722 E134 -K148 -0.0317836890340568 Y143 -W154 -0.0339828257083096 N147 -Q156 -0.0476041588198182 V145 -T153 -0.0500890673408092 N147 -T153 -0.0583403367987674 Y151 -Q156 -0.067454385456525 E134 -N157 -0.0689777266356171 D136 -K148 -0.0694961621633787 K138 -N147 -0.0709512690299086 Y143 -L155 -0.073106208878631 F137 -W154 -0.0737241098687591 N147 -K152 -0.0770761825593884 L142 -Q156 -0.0771990855902267 L142 -N147 -0.0790841145747105 P146 -T153 -0.0792105006146464 P146 -Y151 -0.0901385828521162 F133 -F139 -0.0940547721126443 F139 -P146 -0.0974748218710215 F133 -G140 -0.103403054633735 F137 -Y151 -0.103735029053791 V145 -N157 -0.105697245637447 V145 -Q156 -0.105827563222267 F139 -N147 -0.123851769965817 F133 -N147 -0.124496240479992 G140 -K148 -0.135706086629416 P146 -K152 -0.140660509208583 Y144 -Q156 -0.143408984323832 E134 -P146 -0.14785716297532 P146 -W154 -0.155491101121127 F137 -Y143 -0.155681544732316 E134 -L155 -0.156819305069548 K138 -Y144 -0.159817375181301 K152 -N157 -0.164415115834771 L142 -N157 -0.168583748169008 F137 -Y144 -0.17565061275992 F139 -Y144 -0.177441347779479 K148 -Q156 -0.181514421454896 D136 -L142 -0.189577586391137 V145 -K152 -0.190534245945726 E134 -G140 -0.202970042216219 G140 -P146 -0.211076057383246 N147 -L155 -0.236262353421415 F133 -K138 -0.258123835487645 K148 -T153 -0.265030409178917 S135 -D141 -0.321796491561861 E134 -Y143 -0.336636788378928 D141 -P146 -0.396965014177122 Y143 -N157 -0.502276060163848