[Fri Aug 26 17:32:44 2016] >Input file: TMQ6N022M1D.pdb >TM segments: 644-659 MAIDEN score = 11.3828 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C646 -E655 10 C648 -E655 1.18588197534484 C648 -C657 1.07588173550969 Y652 -C657 1.05217373211743 P650 -E658 0.492126099307707 N649 -C657 0.405807040287753 I647 -C657 0.377218368405418 P650 -E659 0.36212867918643 I647 -E655 0.299377593531542 I647 -K653 0.274209594340231 C646 -C657 0.261966001757317 I647 -G654 0.19122822026295 C646 -S656 0.154276806898461 Y652 -E658 0.14753991649289 N649 -E659 0.14190359924457 G644 -C657 0.13806075780016 N649 -S656 0.128686977156424 C648 -S656 0.120780717835891 C648 -E658 0.120660895672053 I647 -E659 0.115957979997513 T645 -E655 0.0774008698204347 N649 -G654 0.0625974661797446 T645 -G654 0.0574990836293456 N649 -E658 0.0536705380904525 G651 -S656 0.0357072492090873 T645 -K653 0.0316750024050538 G644 -G654 0.0296000832802874 K653 -E658 0.0264832160895712 T645 -Y652 0.000622220872946055 N649 -E655 -0.0152359693846176 T645 -S656 -0.0249559581531078 P650 -C657 -0.0505009939807869 T645 -E658 -0.0774653782269654 G654 -E659 -0.0776222349682349 P650 -S656 -0.0822611884111355 G644 -S656 -0.098488153787085 C646 -K653 -0.102637741020995 I647 -Y652 -0.10332229286737 C646 -G651 -0.12259478337119 C648 -G654 -0.125380452063478 C648 -K653 -0.153797911587394 I647 -S656 -0.16787985545167 G651 -E658 -0.178761012469637 I647 -E658 -0.190521190664514 G644 -E655 -0.202281669422418 C646 -G654 -0.24022537104966 P650 -E655 -0.247819440759066 C646 -Y652 -0.249800763134112 G651 -E659 -0.268826383692354 G651 -C657 -0.312539365510052 C646 -E658 -0.328732484693345 C648 -E659 -0.396538666161011 C646 -E659 -0.414063467413047 K653 -E659 -0.537885884825402 T645 -C657 -0.559087286169931 Y652 -E659 -0.709113563166304