[Fri Aug 26 17:39:33 2016] >Input file: TMQ6P5X7M1D.pdb >TM segments: 243-284 MAIDEN score = -5.4066 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W252 -I257 0.668186456074491 I245 -F253 0.610672643503486 I245 -R251 0.581212947384644 L244 -F253 0.527722787886429 C249 -M254 0.502524473354862 R251 -I257 0.464213990812262 I245 -A250 0.395644413503206 A259 -S265 0.319677124242397 I246 -F253 0.313309133156799 G255 -L266 0.288238780822313 A259 -L266 0.278847504228541 M267 -V273 0.270766100042236 L278 -Y283 0.252275585190736 Y272 -S279 0.248714979655262 C243 -C249 0.218767147669499 L258 -M267 0.202803735297881 L244 -C249 0.187748393123359 S260 -M267 0.183034651887204 K274 -S282 0.18078454379127 E256 -V261 0.17555872668031 G255 -C264 0.151201713694602 I257 -C264 0.150380721448595 R251 -A259 0.149203341251029 T263 -I268 0.125713353533911 I246 -E256 0.123837147565148 G255 -T263 0.122478429359145 C249 -L258 0.119889280704277 I246 -G255 0.113172536659705 G255 -V261 0.103942967157345 W252 -A259 0.098936979761381 C249 -I257 0.0937013483183468 M267 -Y272 0.0872481821080404 T269 -S275 0.0834532961170104 A271 -S279 0.0811914434979792 A259 -M267 0.0787417410216023 L244 -W252 0.0669530931491824 A271 -A281 0.0628618658389402 T269 -K274 0.0626599090211779 I245 -L258 0.0622215857370898 I257 -L266 0.0584866739196375 V273 -A281 0.0530463472003362 A271 -L280 0.0496034238868202 I245 -G255 0.0494071579719664 M254 -F262 0.0488582904931193 F262 -M267 0.04876161799811 A250 -A259 0.0485740820235239 L266 -A271 0.040109550388344 G255 -S265 0.0358105410325817 S275 -Y283 0.033709273097648 L244 -R251 0.0328756083305564 L244 -G255 0.0313416733212075 E256 -F262 0.0308918241706561 V273 -S279 0.0300650992635418 A271 -L278 0.0286871866775975 C243 -R251 0.0276705430654274 V273 -L280 0.0218945370196231 A248 -G255 0.0210429969281751 E256 -T263 0.0196102457355449 C243 -A248 0.018284085926306 F253 -S260 0.014667522648174 V273 -Y283 0.0112146246717613 C243 -L258 0.0100674476728222 V261 -L266 0.00394586358989102 L244 -A250 0.0036863082517653 A248 -F253 0.00311614902517654 L276 -A281 0.00235843292870719 A271 -F277 -0.000651571707430909 L244 -S260 -0.000881569386235875 E256 -L266 -0.00714212254642699 G255 -F262 -0.00901899510592674 S247 -E256 -0.0204390862650403 L244 -I257 -0.0233492792387722 V273 -S282 -0.0243997166239041 M254 -A259 -0.0262893495742422 V270 -F277 -0.0270664863295915 A259 -I268 -0.0414000810207611 A259 -C264 -0.0433008259529553 C243 -M254 -0.0434967799169216 S247 -G255 -0.0475779635377521 S265 -V270 -0.0491667175009756 M254 -V261 -0.0492856703741085 C243 -A250 -0.0506884768648909 A271 -L276 -0.0525938848386325 R251 -E256 -0.0529028378369794 M254 -S260 -0.0536147805572771 V270 -L276 -0.060496125318565 I268 -K274 -0.0625196354460709 Y272 -L280 -0.0659323735057771 K274 -Y283 -0.0660256655354683 A248 -E256 -0.0688177670590654 C243 -W252 -0.0716035865396396 S275 -F284 -0.0716753430079788 V270 -L278 -0.0734557088877441 C243 -E256 -0.0763243486537597 I257 -T263 -0.0802451984270096 A250 -L258 -0.0862152930624029 V273 -L278 -0.0896395711032341 I257 -F262 -0.0899816040149961 M254 -L266 -0.0915799427652173 E256 -S265 -0.0924811202207345 Y272 -L278 -0.0929001146880575 S247 -F253 -0.0944293990844066 Y272 -A281 -0.0955024972382441 A248 -I257 -0.0968807825653091 F253 -A259 -0.100961260266364 A250 -E256 -0.101698511136035 T269 -L276 -0.103701973161872 I257 -S265 -0.10407658132667 M254 -T263 -0.108349576409893 S260 -L266 -0.117110124236773 W252 -S260 -0.119042438326491 Y272 -F277 -0.124747046099897 L244 -M254 -0.131602138611118 I268 -V273 -0.135924183919037 F277 -Y283 -0.137254389200587 C243 -G255 -0.143728651567532 L266 -Y272 -0.147233760177994 G255 -S260 -0.150136331494051 L276 -F284 -0.15121174378212 S275 -S282 -0.152434061955112 C243 -F253 -0.153224100561701 K274 -L280 -0.162376824235093 L276 -Y283 -0.163224396203479 L244 -E256 -0.166184100797878 K274 -S279 -0.169460281464266 L258 -S265 -0.178603351383994 I246 -R251 -0.180560603988075 S247 -M254 -0.183410820571325 S260 -S265 -0.190507600394334 I245 -E256 -0.191065077611927 L244 -L258 -0.199109747766576 R251 -L258 -0.205313405795505 F277 -S282 -0.210733844815429 G255 -M267 -0.219590526625788 S275 -A281 -0.227762378386386 A248 -M254 -0.232025870464175 L258 -L266 -0.23963773865775 S247 -W252 -0.243892553953946 L276 -S282 -0.247439300980146 F277 -F284 -0.250152123221965 I246 -I257 -0.253990231509386 L278 -F284 -0.257625905952933 C243 -I257 -0.268533012346698 L258 -T263 -0.273597834644741 W252 -L258 -0.287399749894526 C249 -G255 -0.289039633602405 S279 -F284 -0.289187928747035 I246 -M254 -0.289402912526732 V270 -S275 -0.299280991638081 I245 -I257 -0.312295141276551 A250 -G255 -0.320255333323248 K274 -A281 -0.340362056621713 A250 -I257 -0.342293396883545 E256 -C264 -0.342509185325088 I245 -W252 -0.344805929714489 I246 -W252 -0.348439042641278 S275 -L280 -0.350934854345344 F253 -L258 -0.354637490304106 C249 -E256 -0.395727152435089 I245 -M254 -0.406393149836333 L258 -C264 -0.432697256329549