[Mon Aug 29 17:35:06 2016] >Input file: TMQ6P8G8S2G.pdb >TM segments: B246-269 MAIDEN score = -6.7879 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- H260B-H268B 0.385846625219932 R263B-K269B 0.289062418831423 A256B-S264B 0.218382742672593 Y262B-K269B 0.212404016181754 M255B-R263B 0.208152179573808 V250B-F257B 0.193906188380029 R263B-H268B 0.187101691365791 V248B-V253B 0.162560060220381 M255B-S264B 0.161325571631441 A258B-V266B 0.149066302778508 V253B-H260B 0.126601917818841 M255B-H260B 0.118294741797417 L259B-V266B 0.114843574312784 I246B-G251B 0.100614369635833 Y262B-H268B 0.100195046564544 V248B-A258B 0.0714740017273199 A256B-L265B 0.0695932403864106 P249B-A258B 0.067687404845123 I246B-F254B 0.0613756245761403 G251B-L259B 0.0587467322523283 I246B-M255B 0.0410948492608263 M247B-M255B 0.0311112643085565 F261B-K269B 0.0203501283151346 G251B-H260B 0.0192954944765155 I246B-V253B 0.0161529661569557 L252B-H260B 0.0132640308162779 F257B-L265B 0.0127968706718971 V250B-A258B 0.010689496253292 A258B-R263B -0.00622706153874208 A256B-F261B -0.00626545116477795 F254B-F261B -0.0196601667169141 V248B-A256B -0.0223894307549104 V253B-F261B -0.0226174343221391 L259B-H268B -0.0238103676700367 A258B-A267B -0.0267147677486435 H260B-A267B -0.0422648717427077 V253B-Y262B -0.0583922263024728 V248B-F254B -0.0597954197086423 M247B-A256B -0.063544331404956 A256B-R263B -0.0715852723521859 F257B-S264B -0.0735720420447601 I246B-L252B -0.0783410259471546 F261B-A267B -0.0821068528319078 L259B-A267B -0.0855143495352726 A256B-Y262B -0.0868505299029178 L252B-F261B -0.087587555525467 H260B-V266B -0.0886164500045616 F261B-V266B -0.1008495510851 F257B-V266B -0.101321014286141 V250B-L259B -0.111258405574636 P249B-F254B -0.112688677470504 F257B-R263B -0.115776157179086 V248B-F257B -0.121235924622966 F261B-H268B -0.123114406679355 P249B-F257B -0.124087599911105 M255B-Y262B -0.126106199748953 F254B-Y262B -0.132531086973635 L259B-K269B -0.135776958084615 F254B-R263B -0.143574347469078 P249B-M255B -0.150294052348501 G251B-F257B -0.155201618961465 A258B-L265B -0.161470811216241 L252B-A258B -0.167613076738396 G251B-A258B -0.171212350145543 P249B-A256B -0.171379787514963 H260B-K269B -0.18461460461496 F257B-Y262B -0.187031196558299 L252B-L259B -0.187564263466241 L259B-S264B -0.196857829015855 A258B-S264B -0.227698749369261 M247B-V253B -0.235601135931791 V250B-M255B -0.268136973215618 G251B-A256B -0.26996570628873 M247B-F254B -0.283362999689961 F254B-L259B -0.289460024399403 Y262B-A267B -0.293791927347795 S264B-K269B -0.296091221858506 L252B-F257B -0.300349345943793 V250B-A256B -0.308401571033714 M247B-L252B -0.321967982684471 F254B-H260B -0.337905374598928 M255B-F261B -0.337931824479662 V248B-M255B -0.358495748217327 V253B-L259B -0.380986801165915 H260B-L265B -0.421548794286938 V253B-A258B -0.425845643030827 L259B-L265B -0.464927712076285