[Mon Aug 29 17:37:39 2016] >Input file: TMQ6PFC5S5G.pdb >TM segments: A89-99_A192-199 MAIDEN score = -0.6957 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T92A-A98A 0.168114857142112 M193A-H198A 0.13155357113291 V91A-A98A 0.112004412754348 N89A-I94A 0.0588655920317973 V91A-L99A -0.103881844458393 V91A-L96A -0.105248029336414 I94A-L99A -0.171191689412641 N90A-H95A -0.204027413970638 V93A-L99A -0.210056162161846 V93A-A98A -0.371784312368106