[Mon Aug 29 17:38:18 2016] >Input file: TMQ6PFC5S8G.pdb >TM segments: A124-134_A139-150_A241-253 MAIDEN score = -0.8300 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L132A-D140A 0.845739901259171 P143A-F149A 0.580971113009346 H243A-C250A 0.44849766541786 P143A-Q148A 0.421531545843649 V131A-S141A 0.400965719593354 L132A-S141A 0.356065115290368 E244A-C250A 0.289313975462229 V131A-V142A 0.282772002193124 D133A-V142A 0.271277026137387 A125A-R130A 0.228197008232373 T245A-C250A 0.216064029228934 E144A-L150A 0.202519934084687 V142A-L147A 0.196594607427723 L247A-K252A 0.182104535969515 R130A-V142A 0.163048412094163 G248A-P253A 0.151351958625475 R130A-A146A 0.149660074533768 D133A-P143A 0.132405141919639 H243A-M251A 0.129530174500835 D133A-A146A 0.128250370184233 L132A-P143A 0.121843538471856 L129A-L147A 0.109938563540501 L128A-L150A 0.106991151556876 L241A-L247A 0.0954624745253878 L128A-A146A 0.0861290221024154 E144A-F149A 0.0809305329460248 L132A-A146A 0.0766340618963106 S141A-Q148A 0.0729703678335936 E246A-M251A 0.0703546806985272 P127A-D133A 0.0698650558084916 R130A-L147A 0.0684736030724218 L132A-V142A 0.0615240458319732 R130A-E144A 0.0578825348510374 L132A-E144A 0.0522500974906173 L128A-Q148A 0.0520625739120701 I139A-L145A 0.0518300328267407 T126A-F149A 0.0408792209746256 P127A-F149A 0.034900166688336 R124A-R130A 0.0330866792262303 L129A-Q148A 0.0330388204556211 L129A-P143A 0.0308009424960876 D140A-A146A 0.0284929517904651 V131A-L150A 0.0220346967927236 T245A-M251A 0.0200714933418653 L242A-G248A 0.0170708786821678 R130A-P143A 0.0155486900314437 H243A-G248A 0.0148539562444053 P127A-L147A 0.0147612932157255 L134A-A146A 0.00593007099144494 R130A-S141A 0.0052579101629453 A125A-V131A -0.00925030372008318 L242A-C250A -0.0105277304554623 D133A-I139A -0.0118142727327801 L132A-F149A -0.0118590565843872 R130A-Q148A -0.0176399819462145 R124A-V131A -0.0247680844543758 E246A-K252A -0.0303524262397448 V131A-Q148A -0.0366619946797462 T126A-L132A -0.0384687978583269 D140A-L145A -0.0387872078952989 L128A-D133A -0.0389286819513994 D133A-D140A -0.0453558766611382 L134A-I139A -0.0479458452265558 L129A-F149A -0.0498715215498873 P143A-L150A -0.0524886159262934 L242A-L247A -0.055551675016801 D133A-S141A -0.0576159435448808 D133A-L147A -0.0578859351832115 L132A-L145A -0.0594934857731673 L128A-S141A -0.0596014763895178 R130A-L145A -0.0597155877701772 L132A-Q148A -0.0597157791903289 I139A-A146A -0.0651874594856086 L129A-E144A -0.0747242835677007 L128A-P143A -0.0758371767800146 R130A-L150A -0.0759331759369912 L128A-L134A -0.0763705697407389 R130A-F149A -0.0784573942814246 D133A-L145A -0.0793858278165209 L132A-I139A -0.0850581189005865 L132A-L147A -0.0875015721689607 L129A-V142A -0.0890936251979255 V131A-I139A -0.0905139952399816 R130A-D140A -0.0965246977580221 L129A-A146A -0.0977950585379777 V131A-D140A -0.0982747447978882 L129A-S141A -0.0997436084568379 L134A-V142A -0.103911338092246 R124A-L132A -0.111370280078838 P127A-L134A -0.119331773955473 L128A-F149A -0.12672526296345 S141A-L150A -0.127902225275254 V131A-L147A -0.129759428666052 V131A-L145A -0.132287307177174 L128A-L147A -0.137200800855442 D140A-L147A -0.148483171807476 L128A-E144A -0.154529416721231 S141A-F149A -0.155089123931258 V131A-A146A -0.163984528945099 L241A-E246A -0.182095563750516 T126A-V131A -0.182173043166339 V131A-P143A -0.182915823895871 L129A-L150A -0.19035613638662 L145A-L150A -0.192183915133502 V142A-F149A -0.211599452863151 V142A-Q148A -0.218563689791304 S141A-L147A -0.219181368908306 L134A-S141A -0.220569727549382 V142A-L150A -0.225765715174214 L134A-D140A -0.24778916009239 V131A-E144A -0.252579084370693 D133A-E144A -0.26715560677421 V131A-F149A -0.270655208155067 R124A-L129A -0.277243206522696 S141A-A146A -0.494977279239777 P127A-L132A -0.5676979795966