[Fri Aug 26 17:46:26 2016] >Input file: TMQ6QAJ8M1D.pdb >TM segments: 61-82 MAIDEN score = -8.6546 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V72 -L77 0.330618694719364 L68 -G76 0.280818752613877 S63 -L68 0.194716606631141 I62 -C70 0.163117075390474 L68 -W73 0.153698696343966 L68 -L77 0.129533462112468 S63 -T71 0.118099085595013 S61 -L68 0.109196575743996 C70 -S79 0.0978048842229309 A64 -C70 0.0898594636693947 S61 -C70 0.0875719008045693 V72 -Y80 0.0864336709313623 T71 -A78 0.0696157810042601 A74 -L82 0.0691417169829283 I65 -W73 0.0608010854564931 A64 -V72 0.0605305298123255 W73 -Y80 0.0520919149513799 V75 -Y80 0.0513323035963928 V72 -L81 0.0459461843484616 I62 -T71 0.0446492830920779 I65 -A74 0.044166415214451 H66 -A74 0.0424998261633082 I67 -A74 0.039559977459712 H66 -T71 0.0309367996465002 T71 -Y80 0.0280728704915023 V72 -L82 0.0207457535753504 H66 -G76 0.0199860873312647 H66 -V72 0.00614696767056699 A64 -F69 -0.00198849014042102 S61 -F69 -0.00488107245628244 C70 -A78 -0.00720187723230747 C70 -Y80 -0.00991031503948037 T71 -S79 -0.0191281182068299 F69 -S79 -0.0271653721048268 I67 -V75 -0.0425641642872385 I67 -G76 -0.0564887633087512 A64 -W73 -0.0617238825712716 S63 -V72 -0.0670306798983731 S63 -C70 -0.0679612165120762 S63 -F69 -0.0813191642083413 W73 -A78 -0.116747807413487 A74 -L81 -0.125674866735826 A64 -T71 -0.127369811210557 F69 -L77 -0.130950461741181 A74 -Y80 -0.155680629661234 I65 -V72 -0.158800560432503 S61 -I67 -0.164377003879597 L68 -V75 -0.173571441847486 F69 -A78 -0.177884097203328 F69 -G76 -0.18055399367182 H66 -V75 -0.194111321747076 W73 -S79 -0.194865983657938 T71 -G76 -0.204776013256408 W73 -L82 -0.208805485841285 G76 -L81 -0.208900493027214 I65 -T71 -0.215836232582142 F69 -V75 -0.257130466124808 W73 -L81 -0.257684642029231 I62 -F69 -0.265485838747971 I62 -I67 -0.272731416157395 V75 -L82 -0.272773001484684 T71 -L77 -0.284786350606836 L68 -A74 -0.298842300482827 I67 -W73 -0.310807749802315 C70 -V75 -0.311040404459304 G76 -L82 -0.330103894227627 I62 -L68 -0.331141065184645 I65 -C70 -0.337371763685464 C70 -G76 -0.340130251158047 V72 -A78 -0.345380332867856 V72 -S79 -0.357880586943522 S61 -H66 -0.35912369927406 F69 -A74 -0.360345800718287 H66 -W73 -0.386716633570476 L77 -L82 -0.404583108064474 V75 -L81 -0.406480988911865 I67 -V72 -0.458818294571481 C70 -L77 -0.514311818839547 A74 -S79 -0.532340994846926