[Mon Aug 29 17:40:49 2016] >Input file: TMQ6RKB3M2G.pdb >TM segments: 273-303 MAIDEN score = 32.4617 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T284 -E289 10 V280 -Q293 8.43212285272165 S278 -F295 4.32695709819836 C281 -K292 2.80525208831381 N273 -V298 2.16637245848781 K282 -K292 1.54832323994469 D275 -V298 0.923164619739555 C281 -Q291 0.72423649908656 Y279 -L296 0.679185843299336 K274 -V298 0.667123314587123 G276 -F295 0.625863657016406 D275 -L296 0.596447744675276 G276 -F299 0.571444251981968 N273 -Q297 0.536049778578297 Y279 -F295 0.527111771610643 V280 -Q291 0.520130643584428 C281 -Q293 0.498531475507968 K274 -F299 0.385098473601497 S278 -L296 0.382432662739258 C281 -D290 0.328634721618383 Q297 -P302 0.257432400130948 S278 -Q293 0.235714066106553 D275 -Q297 0.203829272838846 Y279 -K292 0.202256638476189 G277 -V300 0.197885474995259 D275 -V300 0.183388596682181 K274 -Q301 0.177376382550446 K282 -Q293 0.146595261889336 G276 -Q297 0.145031905532091 V280 -F295 0.143939098512851 N273 -F295 0.143515168506347 G277 -Q301 0.136710834059215 T284 -D290 0.135294858280816 G276 -Q301 0.127333488892268 Y279 -V298 0.124851097332811 L296 -Q301 0.117935969711696 K282 -G288 0.117520363482737 D275 -F299 0.116402661327967 S278 -V298 0.114483946326734 G276 -L296 0.103285491193391 N285 -D290 0.102577840701762 A283 -D290 0.0813787254967169 V280 -A294 0.0803941756734901 S278 -F299 0.0802473823218781 K274 -Q297 0.0761744893854437 G277 -V298 0.0648306504376075 S278 -Q291 0.0608940911231874 N273 -Y279 0.0533165841543066 D275 -F295 0.0523380659919175 G276 -A294 0.0438159334457664 N273 -S278 0.0423331550809112 T284 -Q293 0.0402247060750326 F295 -Q301 0.0396783867014865 C281 -A294 0.0389755660651838 K274 -F295 0.0386875735147807 S278 -Q301 0.0374560533968502 C281 -G288 0.0359875213162812 C281 -L296 0.0191215992373905 V280 -D290 0.0183013315705836 V280 -E289 0.0151282149613714 S278 -A294 0.0111879173268168 K274 -Y279 0.0105287986726177 D275 -A294 0.00472061671564727 K274 -V300 0.00333840966383958 N273 -Q301 -0.00386710018404646 F295 -V300 -0.0130774634222797 G277 -Q293 -0.0213438632284473 S278 -K292 -0.0321926841755302 A283 -Q293 -0.0496114800563376 T284 -K292 -0.0505466797490612 A283 -Q291 -0.0506021860207486 V280 -Q297 -0.0568205378799775 A283 -K292 -0.0699537316497332 N285 -Q291 -0.0700705123537573 A283 -A294 -0.0746456155885297 G277 -K292 -0.0759994889068243 D275 -Q301 -0.081411278013981 G277 -P302 -0.0890046150863865 G276 -Q293 -0.103230759766468 S278 -V300 -0.109509975685673 N273 -L296 -0.109674169959154 S278 -Q297 -0.119650165573283 G276 -V300 -0.12226565059963 K282 -E289 -0.128064169890405 K282 -D290 -0.129647186107433 G277 -F299 -0.131524078929063 G276 -V298 -0.138840835647974 K282 -A287 -0.140533053614675 T284 -Q291 -0.153516820654059 C281 -F295 -0.154070497359458 D275 -V280 -0.159344378962422 G277 -L296 -0.183706358208845 K286 -Q291 -0.184296918628279 N273 -F299 -0.186764184537128 V280 -K292 -0.188079542030236 K274 -L296 -0.193182598693746 G277 -Q297 -0.21121590498647 K282 -A294 -0.214037060896278 Y279 -Q297 -0.225020718770092 V280 -L296 -0.232378931530771 A283 -E289 -0.23773393744117 C281 -E289 -0.252033884017198 Y279 -Q291 -0.253377372665148 Y279 -D290 -0.261075358564395 G277 -A294 -0.290664509222495 N273 -V300 -0.297553939273853 G277 -F295 -0.334685009185847 K282 -F295 -0.380733546302049 Y279 -Q293 -0.398393541060736 A283 -G288 -0.470739561672993 Y279 -A294 -0.691690739011632 K282 -Q291 -0.838782131750331