[Mon Aug 29 17:43:11 2016] >Input file: TMQ6UX27M1G.pdb >TM segments: 86-104 MAIDEN score = 0.1238 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C96 -H104 0.471779606964239 L86 -A91 0.29498012178866 L86 -G92 0.290269355051411 K89 -Y94 0.13822726968152 P88 -Y94 0.100250454713422 C96 -S103 0.0800706583596773 Y98 -S103 0.0508642111249387 A97 -H104 0.0498289279107187 P88 -R93 0.0365074945044559 D90 -F95 0.0177636154302951 K87 -G92 0.0102924229865502 A97 -S103 0.00204566705494535 K87 -R93 -0.032358503270415 A97 -A102 -0.0465142482494576 K87 -Y94 -0.0720284371363054 L86 -R93 -0.127243811413955 L86 -Y94 -0.148836220216761 Y98 -H104 -0.412574994455275 K99 -H104 -0.579543025725737