[Fri Aug 26 17:52:25 2016] >Input file: TMQ6UXP3S1D.pdb >TM segments: A9-29_A32-53 MAIDEN score = -6.1845 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E47A-D52A 0.775098693561216 S28A-V33A 0.726345248529379 F45A-D52A 0.520716389595408 V9A-L14A 0.520096536544192 S28A-S35A 0.496385158151431 P39A-E47A 0.489764941095224 I27A-K32A 0.442530867883998 L48A-A53A 0.424398817631473 A41A-S46A 0.345237933338621 A23A-S28A 0.326278636166013 A19A-L24A 0.286343202353889 G34A-G42A 0.284751495348506 W13A-G50A 0.260890946246042 L24A-G29A 0.259700880588431 S28A-Q37A 0.254473459001894 A23A-S38A 0.22909749147933 S35A-S40A 0.210921629525886 V17A-L24A 0.20853753746585 V17A-G25A 0.207195431827177 G29A-S35A 0.201004098319878 S28A-V36A 0.197575301661033 S28A-G42A 0.194318767758652 L21A-G26A 0.190437068392037 L24A-G34A 0.177672432609615 V9A-V17A 0.172894517449201 I27A-V33A 0.167568473027847 A22A-G42A 0.162333792014029 Y12A-Y18A 0.159063120254096 G26A-P39A 0.155496755612951 G15A-A49A 0.148995215629355 G42A-G50A 0.148362179604957 G42A-A53A 0.141604917487499 F16A-A49A 0.133864277267264 A23A-A41A 0.131490473298181 L21A-G42A 0.129251489451526 V17A-A49A 0.126275444965546 E47A-A53A 0.123890198426161 I27A-A41A 0.123001923121523 A23A-V33A 0.116690322686095 V17A-G26A 0.114408335615141 P39A-S46A 0.113876880088224 A23A-P39A 0.112825118624862 A20A-S38A 0.112270581749458 L24A-S35A 0.107424578079954 V17A-S46A 0.105708417377678 S40A-A49A 0.10514321494002 Q37A-F45A 0.104775466781293 A23A-S35A 0.104035787827739 A19A-S28A 0.100716466490745 I27A-S38A 0.100640214412191 A20A-A41A 0.10025624016226 V9A-A19A 0.0996230178445625 F44A-D52A 0.0990283786486472 L14A-A49A 0.09860201437208 F44A-A49A 0.0975620069787055 V17A-G42A 0.097558826014152 V17A-G50A 0.0973396246628231 A20A-G29A 0.0968698265466297 G34A-A41A 0.0967884572833695 A20A-G42A 0.0952992822756968 S28A-A41A 0.0947359135276988 A22A-S38A 0.0945925847089892 L14A-A53A 0.0939590431097841 S38A-A49A 0.0939375758593295 V9A-G50A 0.0935829653181321 G29A-G34A 0.0920245913306772 G25A-G34A 0.0908758835542218 G29A-P39A 0.086831339299227 V33A-S40A 0.0851239657214782 A20A-G50A 0.0844024640753722 G26A-G42A 0.0822822359945861 P10A-A20A 0.0775746013682639 S40A-E47A 0.0746204929927012 V33A-S38A 0.0727434965971954 Y12A-A20A 0.0709735352773673 P10A-A19A 0.0665421397899895 K32A-S38A 0.0657782530336362 A22A-K32A 0.0655188774981283 A20A-A49A 0.0645442606636517 A41A-A49A 0.0613217223874774 P10A-G50A 0.0580368743712656 A20A-P39A 0.0564892760123019 L11A-A20A 0.0543860308719739 G25A-S35A 0.0541632620439901 A19A-G42A 0.0532199190441482 L24A-F43A 0.0515029956722195 G25A-S38A 0.0505738523353363 A23A-G42A 0.0488721722921879 A41A-L51A 0.0482196009017493 Y12A-A19A 0.0464501406589086 F16A-L48A 0.0461280744077461 G29A-V36A 0.0425586764959065 G29A-S38A 0.042118547670444 A22A-V33A 0.0388904007644904 S40A-L48A 0.0355425652878831 G26A-S35A 0.0351732091502328 F44A-A53A 0.033900558590672 G26A-S38A 0.0333203244795929 A23A-F45A 0.0306253951204809 A19A-G29A 0.0303870620019682 S38A-S46A 0.028151096599184 V9A-Y18A 0.0278025154515502 L24A-Q37A 0.0261823360587776 F16A-F45A 0.0234953689836477 F16A-S46A 0.0225754238567313 F16A-L24A 0.017505991511281 G25A-G42A 0.0168213549592851 Y18A-G25A 0.0164477367940128 A20A-S46A 0.013849997165813 I27A-G42A 0.0125114605283314 W13A-A49A 0.0124556991840672 Y12A-A53A 0.0112906658137005 G26A-G34A 0.010505682167049 W13A-L51A 0.00849165116887907 A23A-Q37A 0.0078876550884423 L14A-G50A 0.00779285066875124 W13A-L24A 0.00573869249925529 P39A-A49A 0.00553085005425902 A41A-G50A 0.0054076939856138 L11A-L21A 0.00462467889887463 G15A-A22A 0.00237068866383083 F16A-G25A 0.00211689634876722 V17A-A53A 0.00127816677279213 S28A-S40A 0.000579234991785305 V9A-L21A -0.00023344388236346 F16A-G42A -0.000326151784034945 Y12A-A49A -0.000558210729075803 F43A-A53A -0.0014399709199342 F43A-A49A -0.00230041631561395 V33A-A41A -0.00678834868246669 I27A-Q37A -0.00762309491029045 P10A-A53A -0.00798081846862608 S38A-L48A -0.00799407876446345 Q37A-S46A -0.00823124534743913 P39A-F44A -0.00944516101766446 S38A-E47A -0.0102598330815508 P39A-L48A -0.0148602169791889 G15A-A23A -0.0191098072934806 G34A-F43A -0.0201857303778201 S28A-F43A -0.0216163134376068 L21A-S46A -0.0221757728003737 S35A-F45A -0.026318923055241 G42A-L51A -0.0293715881966587 Q37A-F43A -0.0318926396037305 F16A-G50A -0.0347509801989427 G15A-L24A -0.0353740644448108 L11A-A19A -0.0357741114377745 I27A-P39A -0.037243747079855 L14A-A20A -0.0378740109801469 A23A-K32A -0.0381229624605726 A20A-S28A -0.0398457346138628 V17A-S28A -0.0413537121775738 V36A-S46A -0.0415498570734449 F43A-L48A -0.0424153263455445 V9A-A53A -0.0463052548953686 L14A-A22A -0.046895560706429 Y18A-S28A -0.0484092402632754 G25A-P39A -0.0486970275858001 V9A-A20A -0.0490961594899537 F16A-G26A -0.0533572171116148 W13A-Y18A -0.0537008485446013 G34A-P39A -0.0564145550168429 Y12A-G50A -0.0579282712868392 L24A-S40A -0.0596392436810746 L24A-A41A -0.0603315134171716 Y18A-G26A -0.062285732146941 F45A-L51A -0.0639796033133919 S35A-F44A -0.0644910264474738 I27A-S35A -0.0652057470038798 S35A-F43A -0.0658725836008798 W13A-A23A -0.0670019515738848 S35A-A41A -0.067242374265537 Y18A-I27A -0.0676662929580773 F16A-A53A -0.0698447509398701 V17A-I27A -0.0727150921275488 V36A-F44A -0.0727388886036144 I27A-S40A -0.0745369572243746 V33A-G42A -0.0789587266184242 L14A-L24A -0.0814913201877445 F16A-L21A -0.0816559673915815 I27A-V36A -0.0827333133062229 A20A-F45A -0.0836966267652794 S38A-F45A -0.0873167656715286 A19A-I27A -0.0921849395879764 L24A-F45A -0.0932054265630855 S38A-F44A -0.0952630267572147 S46A-D52A -0.0959311556339513 L21A-K32A -0.0975248670427007 Y18A-L24A -0.0977989215290398 P10A-Y18A -0.0979075330214636 L24A-S46A -0.101268799858405 L21A-V33A -0.105000664182018 L24A-V36A -0.105819838418844 Q37A-G42A -0.10758336866621 F44A-G50A -0.109961461055724 V36A-F45A -0.115289001152288 G42A-D52A -0.116152573116981 L21A-G29A -0.117757097875488 V33A-F43A -0.117878144434945 K32A-P39A -0.119124379050592 A19A-G26A -0.122713928783801 G42A-A49A -0.123149746121614 S46A-L51A -0.123306140641551 L11A-Y18A -0.123713054664929 G15A-A20A -0.125226244471328 W13A-S46A -0.127655561678057 A20A-G26A -0.12972943021143 F43A-D52A -0.132831773065954 W13A-A22A -0.133773164700181 V17A-F45A -0.134337165139151 F44A-L51A -0.134832454241625 A20A-I27A -0.142417267083825 S35A-G42A -0.145121925489768 G26A-V33A -0.14674001957164 W13A-D52A -0.147621267316847 A41A-D52A -0.149075183200429 L14A-A23A -0.150465201026216 F45A-A53A -0.151303551403737 G34A-S40A -0.151734906092975 L24A-K32A -0.152920146966495 L21A-P39A -0.153339822947221 Q37A-F44A -0.153814778890053 F16A-A22A -0.153871460045472 W13A-L21A -0.154998766757744 L24A-G42A -0.156139431800417 F43A-G50A -0.156850795957817 V36A-F43A -0.157604097595136 W13A-A19A -0.1604800822579 F43A-L51A -0.161748586301701 W13A-A53A -0.164080967806616 G25A-K32A -0.165472877379726 A41A-L48A -0.166991338327436 G42A-L48A -0.167488875647283 A20A-F43A -0.168278265284241 L21A-S28A -0.16925772254997 V9A-G15A -0.169278429618515 W13A-A20A -0.172613325452709 F16A-A23A -0.174538057454886 P10A-G15A -0.177899395880531 A23A-G29A -0.17792444598183 L21A-S38A -0.181731890935677 A41A-E47A -0.184329837815179 S28A-S38A -0.185548685749932 S46A-A53A -0.192862431037985 L14A-L21A -0.193728609215698 P39A-F45A -0.196272499880304 A22A-S28A -0.199244783230155 Y12A-L21A -0.202401571215626 V36A-G42A -0.203685517778191 S28A-P39A -0.206911221180277 G25A-V33A -0.209729927531025 V33A-P39A -0.216730569448144 P10A-V17A -0.220236532221612 S40A-F45A -0.22368690487312 K32A-Q37A -0.240288138980677 A20A-G25A -0.244822264088143 P10A-F16A -0.245624173703267 Y12A-V17A -0.245941793785147 S38A-F43A -0.246245120680393 A22A-G29A -0.253856494162251 F45A-G50A -0.256788134243573 L11A-V17A -0.257649714128576 G42A-E47A -0.259367003946016 S28A-G34A -0.261045864719169 A19A-G25A -0.262164568600271 G26A-K32A -0.269292969713006 S40A-S46A -0.285182717347801 L14A-A19A -0.285286886800743 G15A-L21A -0.288436306622947 I27A-G34A -0.298898371758184 L24A-S38A -0.302093546569439 Y18A-A23A -0.315966441998024 V9A-F16A -0.317363551507746 V17A-A23A -0.339586595335969 V36A-A41A -0.341473539243029 L11A-F16A -0.344219492840379 L24A-V33A -0.403070178490487 V17A-A22A -0.41400766829913 L21A-I27A -0.417643767624511 A22A-I27A -0.453096514877391 L24A-P39A -0.503013486640859