[Mon Aug 29 17:47:34 2016] >Input file: TMQ6XPU4M2G.pdb >TM segments: 92-106 MAIDEN score = -1.7043 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S93 -Q100 0.196827635180857 F92 -D97 0.0978162450760158 D97 -D102 0.0772802164179391 A94 -L101 0.052900577558582 S96 -D102 0.0467676441198044 F92 -P98 0.0465001658802517 A94 -Q100 0.0412239363512574 S96 -V103 0.0398974835771786 F92 -L101 0.0321988509809632 L95 -V103 0.0194694203887265 L95 -Q100 -0.00670960329635673 S93 -P98 -0.0528005669323761 S93 -L101 -0.0611616567708371 P98 -V103 -0.0650469258673709 A94 -D102 -0.157859118882082 L95 -D102 -0.166323031286221 D97 -V103 -0.198125927104924 L95 -L101 -0.200092979306485 F92 -Q100 -0.236434086323825 F92 -V99 -0.245044445001136 S93 -V99 -0.273174154380182 S96 -L101 -0.323552684247804 A94 -V99 -0.368828145439659