[Mon Aug 29 17:48:18 2016] >Input file: TMQ6XPU4M9G.pdb >TM segments: 55-78 MAIDEN score = 16.7582 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K58 -L65 10 W59 -I66 2.32545728319125 K58 -I66 1.34982277019525 W59 -L65 1.17362224340027 K58 -H68 0.648592530699164 F60 -I66 0.604706023480076 F60 -L65 0.544687426473404 T57 -H68 0.528183074018881 S56 -S67 0.505172986460896 W59 -S64 0.444404913817805 K58 -N72 0.425344875210941 H61 -S67 0.393210141537998 W59 -A71 0.329843149849626 W59 -S67 0.324874900628827 N55 -Q69 0.241701414313656 K58 -K63 0.210606505032114 I66 -V74 0.194976752229218 K58 -A71 0.191421248568961 F60 -N72 0.187472669819278 N55 -S67 0.181825373285639 T57 -I66 0.17801831552839 S64 -Y73 0.178008837739546 H68 -V74 0.151242035331256 S56 -S64 0.140515952568483 T57 -S64 0.137983864382501 S67 -V74 0.136648484083746 S56 -D70 0.12411312525692 L65 -I75 0.123925983664378 N55 -H68 0.119205512681742 H61 -Y73 0.117759578351622 S64 -A71 0.11298057529056 L65 -N72 0.0970770472090674 F60 -A71 0.0916974303102611 L65 -Y73 0.0901628665153029 H61 -I75 0.0868683915610806 K58 -Q69 0.085583463192039 L65 -A71 0.0768071015216152 F60 -I75 0.0658659037559303 T57 -L65 0.0644750730941865 N62 -S67 0.0617262683416842 H61 -V74 0.0559263375333066 T57 -Y73 0.0536611814407251 I66 -Y73 0.0497251811320822 W59 -H68 0.0478800457504078 T57 -N72 0.04550058480788 F60 -Y73 0.0454667940798599 W59 -I75 0.040942471967337 Y73 -A78 0.0230117173909867 N55 -F60 0.0143780621202261 S56 -A71 0.0108444865024446 F60 -S67 0.00888804311604607 F60 -D70 0.00865483420037894 W59 -N72 0.00588553551455351 K58 -S64 -0.000242975690957881 W59 -Q69 -0.00204638631860776 N55 -A71 -0.00429222219916957 N55 -D70 -0.00703518190260555 T57 -N62 -0.0132810782831845 H61 -H68 -0.0143241275935164 S67 -Y73 -0.0251917244241027 W59 -D70 -0.0349557056899253 W59 -Y73 -0.0436797677299663 W59 -V74 -0.0504278938140432 T57 -K63 -0.0629210218542581 S56 -K63 -0.0650573250671833 S67 -I75 -0.0742084505159091 S64 -I75 -0.0806198744244307 H61 -N72 -0.0855845970280296 F60 -H68 -0.0908628691657136 F60 -Q69 -0.0934467647159489 K58 -Y73 -0.0987723359806394 L65 -V74 -0.105096473244203 N62 -I75 -0.107468981525003 L65 -D70 -0.114035890437271 S56 -Q69 -0.114539540171088 F60 -V74 -0.11913578061657 H61 -A71 -0.127284031850325 N55 -I66 -0.137468356882499 T57 -Q69 -0.142507697521705 H61 -A78 -0.153011719204652 N55 -L65 -0.158141858932955 S56 -I66 -0.162697889395069 K58 -D70 -0.173625180398426 I66 -I75 -0.182002742337932 S56 -L65 -0.193619125383509 K58 -V74 -0.205441291068841 T57 -S67 -0.207965609590062 T57 -A71 -0.211190654543104 T57 -D70 -0.212160994101992 H61 -I66 -0.227040413166825 I66 -A71 -0.22738040554534 I66 -N72 -0.262559277717505 S67 -N72 -0.32459992772065 S56 -H68 -0.364058629160289 H68 -Y73 -0.407847958374686 H61 -Q76 -0.551725728155474 K58 -S67 -0.659646855459912