[Mon Aug 29 17:51:20 2016] >Input file: TMQ6ZXV5S3G.pdb >TM segments: A498-510 MAIDEN score = -0.6083 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E501A-K507A 0.289095212690774 A499A-K507A 0.217342321514224 E498A-Y503A 0.191560672527264 E498A-M504A 0.120365868801282 E501A-A506A 0.0856314091630153 E498A-A506A 0.0828188992026453 E500A-M510A 0.0718961932456605 Y503A-L509A 0.0692347541263918 S502A-S508A 0.0679328363615879 Y503A-S508A 0.053296090876179 E498A-M505A 0.0444953903054195 E500A-K507A 0.0390246430406958 S502A-L509A 0.035874714849774 A499A-S508A 0.0149774124960977 E501A-L509A -0.000207628922532344 E500A-A506A -0.00338635224691064 M504A-L509A -0.00898232472678018 E498A-K507A -0.0207484405685068 S502A-M510A -0.0450288087510826 E500A-S508A -0.0692975697846343 E501A-S508A -0.0744652308567424 M504A-M510A -0.087080451106099 S502A-K507A -0.163298574453351 E500A-M505A -0.169846233612382 A499A-A506A -0.173365904729468 Y503A-M510A -0.174918863542114 E501A-M510A -0.188735722849622 M505A-M510A -0.233762072391894 A499A-M504A -0.242665058314932 A499A-M505A -0.336041291235083