[Mon Aug 29 17:51:29 2016] >Input file: TMQ6ZXV5S4G.pdb >TM segments: C579-592 MAIDEN score = -3.0861 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K581C-K588C 0.453543155778899 K581C-Y586C 0.235391266465418 L580C-K588C 0.175902293119849 Y586C-E591C 0.169295329050346 E584C-A589C 0.098917661171356 E584C-L590C 0.0701259200147122 K583C-E591C 0.0508350534891298 A582C-L590C 0.0493462188395162 K581C-A589C 0.0481636229184659 K583C-A589C -0.00767626009398459 E584C-L592C -0.0115090726933582 A582C-K588C -0.0226673659475303 A582C-E591C -0.0326350507215635 A582C-A589C -0.0690662380481104 P579C-L587C -0.0720744357443159 K581C-L587C -0.087875274326767 P579C-A585C -0.145098560141376 A585C-E591C -0.147142465694363 P579C-Y586C -0.148873810381605 L580C-A589C -0.158515994087661 P579C-K588C -0.170592401486302 L580C-Y586C -0.173538148081728 K583C-L590C -0.186381640198922 L580C-L587C -0.18769972320154 P579C-E584C -0.194732233650169 K581C-L590C -0.200628792655772 Y586C-L592C -0.200767990831836 E584C-E591C -0.211962033403652 K583C-L592C -0.224243626630711 A585C-L592C -0.242659053597158 A582C-L587C -0.249137094453323 A585C-L590C -0.266003327663766 L580C-A585C -0.302703291060657 L587C-L592C -0.35839373830857 K583C-K588C -0.365009810436685