[Mon Aug 29 17:56:20 2016] >Input file: TMQ74126S3G.pdb >TM segments: 69-93 MAIDEN score = -3.5139 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A76 -E83 0.58236876147855 W77 -E83 0.509517161564464 D88 -F93 0.494557438192617 N79 -Q84 0.37054293748325 E87 -L92 0.291368953630738 E83 -D88 0.26044849204588 N78 -Q84 0.231138362746803 E72 -V81 0.200264719886024 T80 -D88 0.194637208617503 Q84 -V89 0.158590215629312 N78 -D88 0.151567111649246 E72 -E83 0.145803773209833 T71 -Q84 0.143836013794165 N79 -E87 0.133572848240894 D75 -V81 0.121228590102784 T80 -A85 0.116533385224683 D75 -T82 0.108322778212932 Q84 -N91 0.0908941484010232 N78 -A85 0.0908055507675236 N69 -V81 0.0837134018139531 V70 -T82 0.0679860754010421 V70 -Q84 0.0655007641851386 A73 -V81 0.0636983199019552 T82 -W90 0.0590928161413364 F74 -T82 0.0589099990948228 E72 -T82 0.0495047914331979 E72 -W77 0.0480585385928401 F74 -T80 0.0465291928247176 A76 -A85 0.0462247027226069 E72 -N79 0.0345940557040177 A85 -F93 0.0321829325494694 A76 -V86 0.0241313028947756 E72 -T80 0.0209621638181319 V86 -F93 0.0138396080063181 N69 -T82 0.0109934730196706 A76 -Q84 0.00921589400329159 A73 -Q84 0.00793015869333036 F74 -E83 0.00696630298182943 E72 -N78 0.00524804651438515 W77 -Q84 0.00451728487781722 T71 -A76 -0.00172558980229542 N69 -T80 -0.00430060481636207 F74 -V81 -0.00705331679778132 N78 -V86 -0.0120476536594856 T80 -V89 -0.0162134803453782 Q84 -L92 -0.0196139801738386 E72 -Q84 -0.0262394150390145 V70 -A85 -0.02837682986514 T82 -N91 -0.0358751044156378 T71 -A85 -0.0363627410906173 T71 -T82 -0.0399997536483481 A76 -E87 -0.0437628117757444 Q84 -W90 -0.0461125113367058 T71 -N79 -0.0524251236110103 N78 -E83 -0.0556218788030183 A73 -E83 -0.0597244036836369 T82 -E87 -0.062096629819552 T71 -E83 -0.0631119973690222 N78 -E87 -0.0676870157027798 E83 -N91 -0.0701914240513418 T71 -W77 -0.0725599090468847 Q84 -F93 -0.0747942107336332 E72 -A85 -0.076558280640274 V70 -N79 -0.0795160517232119 D75 -Q84 -0.0795910093358361 V86 -N91 -0.082380580735522 A85 -W90 -0.0830995076881651 W77 -A85 -0.0853456107795312 N79 -A85 -0.0883449203654214 D75 -E83 -0.0928339913613645 A85 -N91 -0.0993016581134771 T71 -N78 -0.100196664786872 D75 -T80 -0.101246844747525 A73 -N78 -0.104397095276674 F74 -N79 -0.104581731395304 V81 -V89 -0.108368797379317 A73 -T82 -0.110438651087689 A73 -T80 -0.118848166106459 W77 -V86 -0.12129900656891 V81 -D88 -0.122871181033484 T80 -E87 -0.13132746080051 V81 -W90 -0.135932592554083 W77 -E87 -0.139928070120933 N79 -D88 -0.148925636613007 T82 -D88 -0.162818845401548 E83 -L92 -0.164807293411154 V86 -L92 -0.165116483616169 E83 -W90 -0.173255730506705 N79 -V86 -0.18055925058633 T80 -V86 -0.182286673672295 T71 -V81 -0.190742164195279 V70 -E83 -0.194439104560999 V70 -T80 -0.19890942128859 V81 -V86 -0.20786818554312 A73 -N79 -0.241009191590719 T71 -T80 -0.259773802993126 T82 -V89 -0.266197088120339 V70 -V81 -0.27217320136904 A85 -L92 -0.276647784517801 V70 -D75 -0.278392694024461 E83 -V89 -0.29429331596754 W77 -T82 -0.312432288284246 A76 -V81 -0.31529170109089 V81 -E87 -0.335506963798789 A76 -T82 -0.369883910857755 E87 -F93 -0.416038525936836