[Fri Aug 26 18:08:41 2016] >Input file: TMQ75008M2D.pdb >TM segments: 114-134_ 196-206_ 291-298_ 329-335 MAIDEN score = 38.6937 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C118 -A201 10 C118 -C202 10 P117 -C202 10 V119 -A201 1.77802796650319 K116 -K204 1.3478854188103 P117 -A201 0.900069388232503 K120 -A201 0.89680448140057 L115 -K204 0.863435564660017 L121 -Q200 0.805453272510032 K116 -A201 0.678775399604847 L115 -V205 0.59673919455633 L115 -S206 0.559443623970719 L115 -P203 0.542189280497496 G114 -V205 0.445804317161143 V119 -C202 0.442021719243159 K116 -Q200 0.393569325842554 L121 -T199 0.366518306294493 C118 -T199 0.340190810814365 C118 -P203 0.338904673610602 T122 -T199 0.335972079544406 C130 -T197 0.321929628634414 C293 -K333 0.311483310702174 K116 -C202 0.306861716377271 P117 -T122 0.293174729859247 C125 -T197 0.250417622921669 G114 -K204 0.243050267671489 C293 -N298 0.23753172607039 N131 -S196 0.22960860266112 P296 -S330 0.198061753122873 P117 -S206 0.193537400549312 K116 -P203 0.165617954941544 K116 -L121 0.152621184527141 P123 -Q200 0.143287766473212 I291 -E332 0.122588659948371 V119 -K204 0.1197374693639 G114 -P203 0.119545922128898 T127 -I198 0.119431452701445 T292 -S297 0.116013567537323 G114 -V119 0.108865378669801 A132 -S196 0.099694826221592 K116 -V205 0.0977361010542399 C293 -S330 0.0930225040752662 C125 -I198 0.0899259589700119 L124 -Q200 0.087405321673576 N129 -S196 0.0868140102777484 N298 -I329 0.0867724916767276 T122 -A201 0.0749929104360847 P123 -L128 0.0740628153964502 T292 -W334 0.0723396505041327 L128 -S196 0.0692014807004773 L124 -I198 0.0657325670357128 S297 -I329 0.0645706596734976 S297 -S330 0.047315235102189 N298 -S330 0.0377152898386997 K120 -Q200 0.0369652597159811 P123 -I198 0.0269924882480685 T292 -E331 0.0265984994666244 K120 -I198 0.0228723860713951 S330 -N335 0.0181725435735132 G114 -K120 0.00237900569871341 L115 -A201 -0.00517452899626392 L115 -K120 -0.0074646555649327 L121 -C202 -0.0143876736246376 I291 -P296 -0.0231992252524851 G114 -A201 -0.0259314976751583 C118 -V205 -0.027525619268987 T292 -S330 -0.0307416209416753 I291 -S330 -0.0312738124453364 S206 -T294 -0.0315560898035203 V119 -P203 -0.0362747387240114 C125 -T199 -0.0370481058321137 P117 -V205 -0.041000444467552 V119 -T199 -0.0421763213423256 P123 -T199 -0.0479913303540407 K116 -S206 -0.0559147528442745 L115 -Q200 -0.0562970334600297 L124 -T197 -0.0569949289877458 V126 -T197 -0.0632590874194237 T292 -K333 -0.0666962427669638 I133 -S196 -0.0818508748064353 K120 -C202 -0.0822631151808717 T122 -Q200 -0.0854138506122126 L121 -I198 -0.0925252655440492 N129 -T197 -0.0952847019577154 C118 -K204 -0.0972732002807248 L128 -I198 -0.10416305386835 G114 -S206 -0.107795086775909 I291 -N335 -0.108891846872285 K120 -T199 -0.111244609990548 I291 -W334 -0.12478049912947 K120 -P203 -0.125305286137516 V126 -I198 -0.135905246086425 I329 -W334 -0.149643277341902 I291 -E331 -0.160673349489759 T122 -I198 -0.170385726784336 I291 -K333 -0.213864117181985 T292 -E332 -0.216218467858795 P117 -T199 -0.232191317625728 C118 -Q200 -0.244526252079494 L128 -T197 -0.24557422122153 L124 -T199 -0.255762217941431 L121 -A201 -0.262716268655451 L115 -C202 -0.278623719903494 V119 -Q200 -0.325577316549709 K120 -K204 -0.32914105907567 G114 -C202 -0.339057913534292 C293 -W334 -0.364566505173589 P117 -K204 -0.403067936287291 P117 -P203 -0.407864096665739 C130 -S196 -0.412940996457471 P117 -Q200 -0.429486323226133 T127 -T197 -0.477298256756135