[Mon Aug 29 17:57:31 2016] >Input file: TMQ75008S3G.pdb >TM segments: 94-110 MAIDEN score = -2.9752 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K96 -Q102 0.401671017406676 K96 -E101 0.365431378639874 N97 -H104 0.254437716048798 E101 -D106 0.230268552045774 N97 -Q102 0.218643137802212 M99 -H104 0.170648780708288 N97 -D106 0.153838771553071 D98 -M103 0.086086603556383 M94 -M103 0.08541664259784 W95 -V100 0.0745427049775209 Q105 -L110 0.069523640852222 D98 -H104 0.0641817145239756 M94 -E101 0.0546258129304704 Q102 -L110 0.0246136675420754 W95 -M103 0.0099737529650672 V100 -Q105 0.00671649670743868 M99 -I107 -0.0207328760980627 W95 -H104 -0.0345458389669133 M94 -H104 -0.0410012080032605 M99 -D106 -0.0464298151699563 E101 -S109 -0.05138184681369 D98 -I107 -0.0568648528856358 D98 -Q105 -0.0665376589529946 W95 -Q102 -0.0691166370966307 N97 -Q105 -0.0734596788302261 Q102 -S109 -0.0828989315842192 K96 -H104 -0.083075686891543 V100 -S109 -0.0962006962365203 Q102 -I108 -0.106664812897242 M94 -M99 -0.108068641928207 M94 -Q102 -0.113498919913646 N97 -M103 -0.115103239613227 D98 -D106 -0.135882537981606 K96 -M103 -0.145350105769467 W95 -E101 -0.1549782367215 E101 -L110 -0.163644897137908 E101 -I108 -0.172990329011275 V100 -I108 -0.176034984598616 H104 -L110 -0.184765292916403 V100 -I107 -0.188855621124668 M103 -S109 -0.19272944737431 E101 -I107 -0.197342485802429 Q102 -I107 -0.236869204297962 M94 -V100 -0.2413170751067 V100 -D106 -0.256080120847599 M99 -I108 -0.263969356028133 M103 -L110 -0.285850783584148 M99 -Q105 -0.289892120951091 H104 -S109 -0.371011727821634 M103 -I108 -0.422654702145772