[Mon Aug 29 17:57:53 2016] >Input file: TMQ75008S5G.pdb >TM segments: 623-640 MAIDEN score = -5.5558 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L633 -Q638 0.335903389634382 D628 -L633 0.275092873893137 T627 -E635 0.273738983447534 N632 -Q638 0.235218330581418 Y631 -N639 0.202576244844725 N625 -L633 0.185836725593766 I630 -E635 0.171686680816563 Y626 -Y631 0.103162071932194 S624 -N632 0.0828633268975238 L634 -N639 0.0692097908585811 N632 -N639 0.0325903937337859 N625 -I630 0.0288768199245161 I623 -D628 0.0286773909263728 I630 -Q640 0.0208473324987999 N625 -N632 0.0182813521686416 D628 -S637 0.00859251127639521 S624 -L634 -0.000806715402513081 I629 -S637 -0.0117448692048779 I630 -Q638 -0.0245298084302539 N632 -Q640 -0.0299455100936101 Y631 -S637 -0.0596940692269724 Y631 -Q640 -0.0735713682964971 T627 -N632 -0.0794058603756639 N625 -L634 -0.0796736054647589 N632 -S637 -0.0936337745710512 D628 -E635 -0.0974840260614958 Y626 -L634 -0.104331465012205 I630 -N639 -0.10894572302791 Y626 -L633 -0.10986318566547 Y626 -E635 -0.115703181956055 T627 -V636 -0.117506644502976 D628 -V636 -0.125720130550343 I629 -Q638 -0.132812815852416 I623 -I630 -0.134795005949788 I623 -N632 -0.147753855321477 I629 -V636 -0.167517178536805 I629 -E635 -0.169488841219894 I623 -Y631 -0.176831670632208 S624 -L633 -0.181753073605318 I630 -S637 -0.198022629099459 Y631 -V636 -0.198265491962449 I630 -V636 -0.20258064308047 S624 -I629 -0.212828013205443 L633 -N639 -0.215458523530265 T627 -L634 -0.22978420996226 S624 -Y631 -0.249354700062649 D628 -L634 -0.250597222041669 S624 -I630 -0.257380283373784 E635 -Q640 -0.259637621952319 L633 -Q640 -0.278118094609996 I629 -L634 -0.284931523715651 I623 -I629 -0.295208711447502 T627 -L633 -0.306302726011032 Y631 -Q638 -0.341040299327045 Y626 -N632 -0.48103902628737 N625 -Y631 -0.500093151015258 L634 -Q640 -0.52476020936951