[Fri Aug 26 18:15:01 2016] >Input file: TMQ79670S1D.pdb >TM segments: 100-115 MAIDEN score = -4.6085 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E107 -Q115 0.330743646797168 V102 -E107 0.210918553564423 M101 -H106 0.17984329847646 M101 -E107 0.118699796217484 Q104 -L112 0.0810038198581529 D103 -S111 0.0658452194170513 I109 -Q115 0.0618526624217122 M105 -W113 0.0378584269802698 D103 -I110 0.0171595874265811 Y100 -E107 -0.00448703868202127 M105 -E114 -0.00646662969773537 M101 -D108 -0.00782869956734267 Y100 -D108 -0.0171783689480876 M101 -I109 -0.0185773293192373 D108 -Q115 -0.0411231439191746 M105 -Q115 -0.043852510898341 E107 -L112 -0.0462529715746047 H106 -E114 -0.0483180577113478 E107 -W113 -0.0578795700609942 Y100 -I109 -0.0674744954973254 D103 -D108 -0.0704045037290539 Q104 -S111 -0.0919452126468723 V102 -S111 -0.0926275318912075 D108 -E114 -0.0931783658624842 Q104 -W113 -0.10422441970418 Q104 -I110 -0.109737028635061 H106 -W113 -0.133326125947966 D108 -W113 -0.135175416578353 D103 -I109 -0.15632832037706 D103 -L112 -0.160202277283159 V102 -I110 -0.16531387982303 V102 -I109 -0.186432696319834 M105 -S111 -0.191582773629635 E107 -E114 -0.209003250109998 Y100 -M105 -0.210082826009034 H106 -L112 -0.216113060360741 Q104 -I109 -0.226306171749472 I109 -E114 -0.230497285833158 Y100 -H106 -0.263380834520517 M101 -I110 -0.277312767732515 M105 -L112 -0.277749987158105 V102 -D108 -0.28033711433958 I110 -Q115 -0.340447863521131 H106 -Q115 -0.342145805653496 H106 -S111 -0.370566630054936 M105 -I110 -0.418528438647726