[Mon Aug 29 18:07:35 2016] >Input file: TMQ7K4B6S2G.pdb >TM segments: A647-660 MAIDEN score = -1.5905 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q649A-Y654A 0.266524627373585 T647A-E655A 0.262644661453123 E652A-Y660A 0.175009467946833 E655A-Y660A 0.17305711861971 E652A-A657A 0.153162921585229 Y654A-Y660A 0.145223456456028 Q649A-A657A 0.109515158684818 A648A-Q656A 0.0900962377986874 E652A-L658A 0.0630292727031589 A650A-E655A 0.0624917874474962 Q649A-L658A 0.0585773714644553 Q651A-L659A 0.0258491922846975 T647A-A657A 0.023407825737372 T647A-Q656A 0.0084532611203052 Q649A-Q656A -0.0034317263518453 Y654A-L659A -0.00654409706989778 A648A-A657A -0.0243664956687981 Q651A-Q656A -0.0571979501043954 E652A-L659A -0.0616949267834501 T647A-E652A -0.0626774969660566 Q651A-Y660A -0.0674404899845505 A650A-L658A -0.0764918608632117 Q649A-E655A -0.0782237865336264 V653A-Y660A -0.0810713745546892 A648A-Y654A -0.0917552740093235 T647A-Y654A -0.0978277509683658 A648A-V653A -0.103333792344355 A650A-L659A -0.166095347228861 A650A-A657A -0.195249376892283 T647A-V653A -0.211200082924628 Q651A-A657A -0.213962222202079 A650A-Q656A -0.219870545712926 Q651A-L658A -0.26417439167396 A648A-E655A -0.278481175315836 V653A-L659A -0.397332021073035 V653A-L658A -0.449082996129316