[Mon Aug 29 16:43:44 2016] >Input file: TMQ7NV37M1G.pdb >TM segments: 304-354 MAIDEN score = -10.7889 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V324 -A329 0.539571311192192 E310 -V315 0.526298905622475 M346 -K351 0.408759433670481 E309 -Q317 0.289769598580946 G327 -D334 0.27004703891349 A336 -G344 0.264392516043904 A342 -A349 0.234846133194184 K341 -M346 0.234790224894533 R323 -K331 0.225253577870683 E338 -V343 0.223887400195003 A322 -S330 0.215834878932955 V347 -E352 0.212510731149102 D320 -G327 0.211405748800777 Q317 -T325 0.196399642640251 D345 -M350 0.184340297595215 K331 -S339 0.181879677983123 T337 -D345 0.160958322619506 E338 -H348 0.156708394200882 G340 -H348 0.152343263373395 T316 -T325 0.136594239211187 E309 -N318 0.131891027024972 S307 -T314 0.125846866072549 E326 -K331 0.121872881292951 T314 -A319 0.121034982686707 A333 -E338 0.117234067052864 S339 -V347 0.112274650177997 S307 -V315 0.111403437955109 V324 -S332 0.108301689610769 E309 -T316 0.102643013053892 E326 -D334 0.10099532981144 N321 -A329 0.0976883888351059 S313 -D320 0.0971744903165352 T304 -A312 0.0901675350180371 G340 -D345 0.087952152726479 T304 -S313 0.085111411789096 A306 -V315 0.0828546106531309 S305 -T314 0.0820180249224341 R323 -I328 0.0820076573406787 G344 -E352 0.0815072410616295 A342 -M350 0.075504882203478 R323 -S330 0.074859366848181 T337 -V347 0.0706968800581746 S313 -N321 0.0665154935693559 R323 -A333 0.0641090674879355 M346 -E352 0.0611312785539346 A333 -K341 0.0571006235389806 G327 -S335 0.0545972232205171 I328 -S335 0.0526114735876619 S332 -G340 0.0488722543562892 S339 -H348 0.0460653291903244 M311 -T316 0.045629520625723 V343 -K351 0.0453251377039727 M311 -A319 0.0430415056410385 T316 -R323 0.0408564811940062 A319 -G327 0.0384650799442552 S330 -S335 0.0382068712259453 S335 -V343 0.0340968738820931 D334 -A342 0.0339383070981949 V315 -V324 0.0325898490001215 T316 -V324 0.03151059671026 V315 -R323 0.0302586076974734 I328 -A336 0.0302230784836564 V324 -S330 0.0274671270443383 G340 -M350 0.0271811825744779 S332 -K341 0.0260587618559156 D320 -A329 0.0243075568074594 Q317 -V324 0.0228895681840378 A329 -D334 0.022734704633538 S330 -G340 0.0224671032036392 V324 -A333 0.0214469933431261 N318 -T325 0.0213501989468403 S330 -S339 0.0204022767023981 S305 -S313 0.017311486260644 H348 -A354 0.0165565931773806 A312 -D320 0.0162170627556009 S332 -E338 0.00728195630469705 G344 -M350 0.00306178363951615 A342 -V347 0.00305855701357505 V308 -T316 0.000573286107633741 G327 -T337 -0.00148022093785616 V343 -H348 -0.00390674115657852 T325 -A333 -0.00446370573178623 D334 -V343 -0.00543880630576687 A306 -T314 -0.0055390473917809 V347 -A354 -0.00773697137043006 S335 -G344 -0.00867908330382905 E326 -S335 -0.00898636926239429 M346 -A354 -0.0114786842846133 Q317 -E326 -0.0122592947745515 I328 -T337 -0.0151652059862126 T325 -S330 -0.0152571964673709 N321 -S330 -0.0228797136575702 E310 -N318 -0.0240317127609491 S305 -V315 -0.0242755766032814 A306 -M311 -0.0244071321959951 S313 -A322 -0.0269507797197424 S339 -D345 -0.0282508238930634 S307 -S313 -0.0294188941890638 T325 -D334 -0.0331692259658878 A329 -A336 -0.0335026320632981 A312 -Q317 -0.0337623054999066 V308 -Q317 -0.0350045342131211 A333 -A342 -0.0353853495075551 A329 -E338 -0.0363131769955676 V308 -S313 -0.0369871137194302 D320 -T325 -0.0375223711404118 K341 -A349 -0.0376460793634676 Q317 -R323 -0.0390404968819111 T314 -R323 -0.0419302717451409 E310 -A319 -0.0430076165424255 A319 -I328 -0.0437206581783123 V315 -A322 -0.0469935827628012 A342 -H348 -0.0487547646621778 A329 -T337 -0.0495573145750119 Q317 -A322 -0.0497989464870636 N318 -E326 -0.0508237039049444 S330 -E338 -0.0513161927310875 E310 -Q317 -0.0522459308316328 G327 -A336 -0.0531530625535677 D334 -S339 -0.0541759797754869 S335 -K341 -0.0550665305355558 D334 -G344 -0.0567988262944428 G340 -A349 -0.0604322614932171 E326 -S332 -0.0630125040493215 T304 -E309 -0.0641710693487401 A322 -I328 -0.0652547769421226 A312 -N321 -0.0673093461047014 N318 -G327 -0.0687037996482918 S339 -M346 -0.0701696591422452 T337 -M346 -0.0713279220007399 T316 -N321 -0.0802309589849992 A319 -V324 -0.0839788852970527 K341 -H348 -0.0851435240790908 A312 -N318 -0.0872579893957568 R323 -S332 -0.0884222777013806 S335 -A342 -0.0915770858840741 K331 -G340 -0.0922663686977274 N321 -G327 -0.0928491626252033 G344 -K351 -0.0940557276437559 A333 -G340 -0.0951956981042712 E338 -D345 -0.097039938171177 D345 -E352 -0.0972622007194909 E326 -A336 -0.0977554878697355 E309 -A319 -0.0988787379720839 A312 -A319 -0.100183644299802 K341 -V347 -0.100345701635323 S332 -S339 -0.102156834599524 K331 -A336 -0.102405863882252 A319 -T325 -0.106135883289527 A336 -K341 -0.106905007520217 A319 -E326 -0.109200217965581 S313 -N318 -0.10977142684124 N318 -I328 -0.114969602781364 T325 -K331 -0.115088829676436 D320 -I328 -0.116787430778553 S332 -T337 -0.11964780691422 V343 -E352 -0.120472516756936 D320 -E326 -0.120494486635804 G344 -I353 -0.121407943417 V347 -I353 -0.121744696114476 K341 -M350 -0.122318311779779 V315 -D320 -0.124588680507366 G340 -V347 -0.126170698969366 T314 -A322 -0.126744377444669 N321 -K331 -0.128133307531948 G327 -S332 -0.128954515041205 A336 -V343 -0.134152937458515 K331 -E338 -0.135176461640113 A322 -K331 -0.136831568206485 T314 -N321 -0.139193245348582 A342 -K351 -0.140446479275288 E309 -V315 -0.143171471925356 S305 -E310 -0.145053982653734 T325 -S332 -0.147310415246606 E326 -A333 -0.14900241539454 S313 -A319 -0.152290254546312 D345 -I353 -0.154277727931717 V343 -M350 -0.155115816869253 G327 -A333 -0.15516157595728 M311 -Q317 -0.155819242082714 E338 -M346 -0.157179958467861 I328 -D334 -0.157596474721336 E309 -T314 -0.162815883489071 D345 -K351 -0.164536143230098 T304 -E310 -0.170363060933767 A336 -D345 -0.172048956684099 V308 -T314 -0.172309279119683 A336 -A342 -0.172738963833717 G340 -M346 -0.172756806790509 S305 -A312 -0.172936367269138 D334 -K341 -0.174818427498163 D334 -G340 -0.176261631161506 K341 -K351 -0.178270476499351 M346 -I353 -0.179612413884571 N321 -I328 -0.185220121162664 E338 -V347 -0.185587470798331 V315 -N321 -0.189262041136887 R323 -A329 -0.192298098479344 E310 -T316 -0.192934939371268 S305 -M311 -0.193122589480924 A329 -S335 -0.193801036756594 A306 -S313 -0.19892328566217 N321 -E326 -0.202170522413294 T337 -G344 -0.209136588350419 V343 -A349 -0.212533041414719 T316 -A322 -0.213547270217996 V324 -K331 -0.216118211986549 T337 -V343 -0.218103421358383 A322 -A329 -0.221500318079196 T314 -D320 -0.22413032580241 I328 -A333 -0.224794063371327 A333 -S339 -0.227740884695561 E338 -G344 -0.228275808600152 A349 -A354 -0.233765472082066 S330 -A336 -0.239181199831023 S330 -T337 -0.239931092052648 M311 -N318 -0.244648886618166 A306 -A312 -0.245603517485859 T337 -A342 -0.253018246656419 V324 -D334 -0.254759899259423 H348 -I353 -0.256108202318476 S339 -G344 -0.256422173973055 S335 -G340 -0.261484076669211 A322 -G327 -0.263336037731792 K331 -T337 -0.267969210623933 V308 -V315 -0.271812452928816 T304 -M311 -0.287632043154839 N318 -V324 -0.324611784605934 S307 -A312 -0.365547382272743 N318 -R323 -0.387537253702047 G344 -A349 -0.468980457858397