[Fri Aug 26 16:51:23 2016] >Input file: TMQ7Z5S9M1D.pdb >TM segments: 88-144 MAIDEN score = -4.4131 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- N102 -W107 2.4758958401851 E121 -L127 0.837205924317557 W114 -A119 0.65205814502837 G94 -F112 0.625210380230169 F115 -E120 0.6038250855335 G90 -F115 0.566995494316866 G94 -S109 0.564332409083959 I97 -N102 0.500605444207875 L91 -F115 0.495981575055998 G92 -I97 0.435486192966242 A139 -F144 0.366685685121281 A119 -N124 0.324845013659445 G92 -G113 0.299268759119088 L93 -G116 0.284901786353004 F112 -E120 0.283890270207439 I130 -S135 0.274592214008047 E120 -L126 0.273598043290774 F101 -W107 0.272310643488447 L91 -G116 0.265738177060684 L93 -G99 0.265298140633433 G92 -W98 0.252113595870822 Y129 -L134 0.246874144985716 T88 -L93 0.238049236105896 G92 -F112 0.23451512617781 W114 -E120 0.231153356069973 N128 -S135 0.214506921152106 G94 -T105 0.205788314993558 N102 -S110 0.196609940988619 G116 -N124 0.194470754825526 G113 -E120 0.190683771265387 S109 -G116 0.189770576080438 F112 -A119 0.17904295353729 N124 -G131 0.16867037571842 S100 -A108 0.161447732803488 G92 -A108 0.160595590145555 D118 -N124 0.160417295614852 D118 -P125 0.158408431555006 L93 -W114 0.154086960381084 G90 -G113 0.146160462989099 I89 -E120 0.144844666060842 L91 -L117 0.140538046759985 L91 -E120 0.135288593076274 E121 -Y129 0.135123760301012 L117 -L126 0.134503770203684 V122 -Y129 0.134174187561971 I97 -A108 0.129917909104098 S110 -G116 0.127222068240223 I130 -V136 0.127059538870558 E120 -N128 0.125836708491107 N124 -Y129 0.124027511652688 L104 -S109 0.122976367965968 G92 -E120 0.122101567744423 G94 -R111 0.12151743071395 G90 -R111 0.12077758575573 I97 -G106 0.117690026834881 S110 -A119 0.114427895802079 W98 -T105 0.113413676122237 I97 -W107 0.112728943386804 W98 -A108 0.111865958701151 L126 -A132 0.109760683422639 A132 -F140 0.108315503846299 I95 -N102 0.107893749428415 V136 -L143 0.107489589804227 A103 -S110 0.107229762660354 L91 -W114 0.107067957814034 E121 -N128 0.106970454504463 G92 -S109 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