[Mon Aug 29 16:59:08 2016] >Input file: TMQ80W04M1G.pdb >TM segments: 513-550 MAIDEN score = -1.5178 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I523 -S528 0.486527477063166 L537 -Q542 0.455664307860101 E518 -K524 0.382312918816911 Q540 -Y545 0.346226273822197 E518 -Q527 0.317690660642828 D514 -R521 0.309266370615679 L530 -E535 0.298496316477546 E535 -Q542 0.28899842984003 L516 -R521 0.280856682956653 K524 -H529 0.275970606936565 M534 -Q542 0.2506670723604 D536 -D544 0.249623805189493 H529 -D536 0.24641115727765 L537 -T546 0.240931380441141 Q527 -S533 0.239546891707607 Y545 -Q550 0.235083268874785 D514 -E519 0.228779025831455 Q542 -Y547 0.223460148087211 H529 -K538 0.216213144478721 E518 -I523 0.17472938107043 I523 -H529 0.172694342607548 H529 -M534 0.168327804718969 M534 -L541 0.150687884880947 T539 -T549 0.128965245249943 G526 -E531 0.127034156464466 L513 -E519 0.12331735613605 E522 -S528 0.117259125089265 T515 -E522 0.112570594741034 L520 -S528 0.111384838281207 E519 -H529 0.107430112524483 D514 -E522 0.104335760463713 L537 -D544 0.101411942399527 E525 -D532 0.100301882280068 L541 -Q550 0.0974330646842698 Q540 -M548 0.0954114343606705 E518 -S528 0.0937792936226711 L541 -M548 0.0902879223656936 L530 -L537 0.0894176500801382 L513 -I523 0.0833263730245246 E522 -E531 0.0826898618726724 E531 -T539 0.0811252635045872 E518 -G526 0.0801477309843615 S533 -L541 0.0777840482086667 L516 -K524 0.0751835808144978 E519 -Q527 0.0749700981744748 L516 -E522 0.0703463016514112 L537 -Y545 0.0683252940473156 E525 -E531 0.0668221480446238 E518 -H529 0.0655347998575495 D532 -T539 0.063024185829633 T515 -K524 0.0623342749057307 I523 -L530 0.0620327860127685 D532 -K538 0.0554021555761937 K538 -T549 0.0421008679465877 T539 -D544 0.0305025823805538 S528 -D536 0.0264289740715011 T539 -Y545 0.0240537077875715 L517 -E525 0.0224850547821838 D536 -R543 0.0158257560224102 L513 -E518 0.0121992361254062 E522 -S533 0.00845277628607111 S533 -Q540 0.00841709890255071 K538 -Y547 0.00723223367695613 E522 -H529 0.000934607385545627 S528 -E535 -0.00398758377549946 S528 -M534 -0.00850008021708604 S533 -Q542 -0.00897452955001654 R543 -Q550 -0.00970766300698811 E525 -S533 -0.00999999035537122 E525 -L530 -0.0152801034091695 Q540 -T546 -0.0200543890486651 E522 -L530 -0.0255336482979605 L520 -E525 -0.0274650209806682 D536 -T546 -0.02991889437165 G526 -D532 -0.0311590984433454 E531 -K538 -0.031687373509998 E535 -Q540 -0.0322623807305935 D536 -L541 -0.0333982110052342 Q540 -T549 -0.0336671586269867 Q527 -D532 -0.0366508635759159 L520 -H529 -0.037982439415138 R521 -G526 -0.0386528523656264 D544 -Q550 -0.0389322983923101 R543 -T549 -0.0401612576874575 D514 -I523 -0.0436095310021343 Q542 -T549 -0.0477184765533689 L530 -K538 -0.0479988231844785 L513 -R521 -0.0500207236559289 T539 -M548 -0.050616768582092 S533 -K538 -0.0555020353835899 K538 -M548 -0.0572309056786138 L530 -T539 -0.0599607406468805 R521 -L530 -0.0616108525868646 D536 -Q542 -0.0667180476690912 E519 -S528 -0.066932948251933 L517 -Q527 -0.0721179888092371 R521 -H529 -0.0774817994276487 L520 -Q527 -0.0828193892101297 L537 -R543 -0.0830370764086048 T515 -R521 -0.0843756635667767 E531 -L537 -0.0877032562702267 R521 -S528 -0.088087467019878 H529 -L537 -0.0897309108804132 T515 -I523 -0.0940656127321091 L520 -G526 -0.0941548571119775 E519 -K524 -0.0948142732717043 D544 -T549 -0.0958871061061819 L537 -Y547 -0.100512567155765 L541 -Y547 -0.104925704826254 L517 -G526 -0.105309859386899 H529 -T539 -0.113090631993733 L541 -T549 -0.115089017223076 E522 -D532 -0.118431435637927 H529 -E535 -0.118661897366474 E531 -D536 -0.119499432176492 Q527 -M534 -0.119756725074007 T539 -Y547 -0.123265928742417 L517 -E522 -0.124119172303655 L517 -S528 -0.134325534656229 L513 -E522 -0.141226219957629 E519 -E525 -0.142444170955935 R543 -M548 -0.14593892363829 Q540 -Y547 -0.149331734220157 R521 -Q527 -0.150198088863114 E535 -L541 -0.151193879032463 L517 -I523 -0.152713635039924 M534 -Q540 -0.163930400131594 L516 -E525 -0.164007180344537 K538 -D544 -0.17413278885716 Q542 -M548 -0.17702871719476 T515 -L520 -0.182464213257158 K538 -Q550 -0.18280690674195 L513 -L520 -0.188764290677042 E518 -E525 -0.192271059052442 Q542 -Q550 -0.193423547382571 K538 -Y545 -0.195217305861962 E519 -G526 -0.200322123509888 L517 -K524 -0.230705239289272 S533 -T539 -0.237391969592179 T539 -T546 -0.250938479324629 D532 -L537 -0.25786767086343 D514 -L520 -0.2602407801886 K538 -T546 -0.261603116466738 K538 -R543 -0.265318885837655 S528 -S533 -0.265684523722767 D536 -Y545 -0.29162045901411 M534 -T539 -0.300667888366664 L530 -D536 -0.308157893397197 L541 -T546 -0.327757494560414 L516 -I523 -0.36369277349215 E522 -Q527 -0.392752020222751