[Mon Aug 29 17:08:35 2016] >Input file: TMQ82ET9M1G.pdb >TM segments: 281-340 MAIDEN score = -12.2247 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V318 -E329 0.751776268992798 M319 -E329 0.705435788336686 V318 -Q332 0.671542748429703 L298 -Y304 0.662316474859495 P315 -Q332 0.626362443470571 E329 -I334 0.620985837128105 G328 -R333 0.573124122967354 A325 -L330 0.571564987548894 S324 -L330 0.489241485993606 A295 -Y304 0.466777574544448 F322 -E329 0.351826801697594 T311 -T316 0.345609546813571 C282 -G289 0.340064767867525 C282 -F292 0.333549533055307 P315 -R333 0.331465482108999 A302 -G308 0.330207760275059 T316 -R333 0.329532281866893 L323 -L330 0.323479470173889 C282 -V318 0.306875145847148 L321 -E329 0.306074837721758 E329 -R337 0.284680504915074 M319 -G328 0.283518439496544 Q332 -P339 0.271572258327279 G288 -Y304 0.269518496613747 M320 -R326 0.266998761073521 L298 -G303 0.263141180142138 M319 -R337 0.249372533869646 F322 -G331 0.242944739681543 T316 -L323 0.242163226108877 A325 -R333 0.241620382869207 C282 -I338 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