[Mon Aug 29 17:23:14 2016] >Input file: TMQ86UP6S2G.pdb >TM segments: D160-170_D174-185_D190-196 MAIDEN score = -2.6752 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L161D-Q185D 0.714383471953838 P168D-H174D 0.4337453776593 Q185D-K193D 0.359020882094995 I184D-I192D 0.346367347903648 H183D-K193D 0.322699894840429 T160D-W182D 0.283366800724913 H183D-K191D 0.282311967340851 N169D-C180D 0.275870457057834 T166D-P175D 0.252177857252274 E162D-K193D 0.251655556131049 N169D-P175D 0.234356560206327 T160D-Q185D 0.225127884922037 Y170D-F196D 0.21837528676812 F165D-V181D 0.206805066538145 W182D-K193D 0.200834963534692 T160D-I184D 0.195609570876034 Y170D-C180D 0.192315631936583 G163D-H183D 0.192259476213613 S164D-Y170D 0.184505342045748 S164D-H183D 0.181406464393052 S164D-N169D 0.171216940036954 H174D-Y179D 0.145165433597799 L161D-I192D 0.143412570135057 N169D-E176D 0.1386957088428 T160D-K193D 0.126686074220705 S167D-P175D 0.123779596704019 G163D-Q185D 0.122652264877723 G163D-F196D 0.115231915273932 P168D-C180D 0.103226133826765 E162D-I192D 0.0996466299520957 Y170D-E176D 0.0896802672186476 T166D-Y179D 0.0891474318086681 N169D-A178D 0.0873539961633902 T160D-K191D 0.0866955299427983 Q185D-K191D 0.08522720700173 E162D-L194D 0.0849967353213765 T160D-H183D 0.0840209643917285 G163D-K193D 0.0839098375262382 E162D-Y190D 0.0834875891374514 T166D-I184D 0.0811522029672478 H183D-I192D 0.0705230150388187 P168D-W182D 0.0691609016247545 S164D-W182D 0.0595369501345022 T160D-F165D 0.0580773126153558 F165D-N195D 0.0566575131197597 P168D-V181D 0.0543540272943241 Q185D-L194D 0.0504075476797468 E162D-N195D 0.04438471238422 E162D-W182D 0.0440434658623238 T166D-V181D 0.0411997602222964 L161D-H183D 0.0352235916984023 S167D-E176D 0.0324635711571677 S167D-H183D 0.0322499840768762 P168D-E176D 0.0293000810246968 G163D-N195D 0.0288980913404058 H183D-L194D 0.0243745936322031 V181D-L194D 0.0211870494579753 H183D-Y190D 0.0172014360349757 F165D-L194D 0.0156388008139001 S164D-Q185D 0.015415640328156 S164D-F196D 0.0146139028340426 S164D-K193D 0.0105351122302935 E162D-F196D 0.00774213787155864 T160D-L194D 0.000153838347777047 L161D-L194D -0.00477404912737533 T166D-A178D -0.0219482870858525 I184D-Y190D -0.02401781802513 P175D-C180D -0.0243536070060586 F165D-K193D -0.0248035941586604 G163D-W182D -0.0259695824483877 S167D-N195D -0.0314668994204095 S167D-H174D -0.0328957114106032 T166D-H183D -0.0399150598592319 I184D-N195D -0.04523896685693 N169D-Y179D -0.049566074262867 G163D-K191D -0.0546016844254056 T166D-N195D -0.0659663990605739 S167D-C180D -0.0673742130136543 S167D-L177D -0.0684416431467216 Y170D-A178D -0.0690945419507276 P175D-V181D -0.0729636529002277 I184D-K191D -0.0747520746665193 T166D-L194D -0.0752201086500919 F165D-Q185D -0.0758119684877636 S164D-I192D -0.0867012579568909 L161D-N195D -0.0891903185298744 E162D-Q185D -0.0905642986114021 Q185D-Y190D -0.0920299895857557 F165D-H183D -0.0933191383384697 G163D-L194D -0.0936807202078744 W182D-I192D -0.0954709012881541 L161D-K191D -0.0988298946870128 E162D-I184D -0.103179467193787 E162D-H183D -0.103185000348879 S164D-V181D -0.106181426390056 S164D-I184D -0.108703743344613 F165D-C180D -0.109976894174335 S167D-A178D -0.11126732107357 P168D-L177D -0.11184121724815 G163D-I192D -0.114225838260943 F165D-I184D -0.129354047255267 T160D-Y190D -0.131761136731604 E176D-V181D -0.134434707356569 F165D-W182D -0.135035201662545 P168D-Y179D -0.135722223623336 L161D-Y190D -0.138517793324181 N169D-L177D -0.139574656111594 F165D-I192D -0.141001877348296 T166D-H174D -0.14164422568211 S167D-L194D -0.146828789740384 F165D-F196D -0.14695791572013 P168D-A178D -0.14753454746504 S167D-F196D -0.148027019632563 I184D-K193D -0.149164643938787 F165D-Y170D -0.162357630521039 F165D-H174D -0.163965375131261 Y170D-P175D -0.165660224648749 W182D-N195D -0.16603875739761 E162D-K191D -0.183703165615561 N169D-H174D -0.195752444303431 Q185D-I192D -0.208923359653684 L161D-W182D -0.2114876430728 W182D-L194D -0.211905528802546 H174D-C180D -0.220709735458255 T160D-I192D -0.236354324163909 L161D-K193D -0.239768087603621 S167D-W182D -0.254398115756397 S164D-L194D -0.267921183679549 H174D-V181D -0.268345723857257 G163D-I184D -0.275102375226043 S167D-Y179D -0.283903625803503 T166D-F196D -0.309604994039768 S167D-V181D -0.315525275411973 T166D-W182D -0.316831196569477 S164D-N195D -0.318989819307048 L161D-I184D -0.322984370995712 I184D-L194D -0.334167980925788 T166D-C180D -0.361326927164738 P168D-P175D -0.688292412231901