[Mon Aug 29 17:23:36 2016] >Input file: TMQ86VH4S10G.pdb >TM segments: B231-265 MAIDEN score = 13.5685 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R232B-L255B 10 I241B-I265B 1.59842129682634 I234B-L258B 1.29708572227847 R242B-I265B 1.18565558318114 L231B-L255B 1.05067723832173 Q237B-L260B 1.03834472829168 L236B-L260B 0.982696526299005 L231B-W252B 0.805560777393369 W238B-L260B 0.750789615342253 Y235B-L260B 0.627573404902708 L236B-S261B 0.52383893564806 W238B-S261B 0.48310226694468 S243B-I265B 0.466283814461272 L231B-S254B 0.420529347384756 Y235B-L258B 0.413457383531561 S233B-L258B 0.397057589033363 R240B-G262B 0.378930066762054 W238B-G262B 0.366957665427956 I234B-L255B 0.363422340441662 Y235B-N257B 0.335022142245287 R242B-N263B 0.32878132348843 I241B-N263B 0.317596695650385 L236B-L258B 0.294621994324802 I244B-I265B 0.292082142004801 Q237B-D259B 0.275237169122621 R232B-L258B 0.269717772271198 L236B-D259B 0.268610206610528 L231B-S253B 0.266931268699723 L231B-N257B 0.209808145733823 S233B-S261B 0.203559809991925 Y235B-D259B 0.186539300862248 T249B-H256B 0.184358055489928 I234B-D259B 0.17969177385359 R242B-D259B 0.179091166594392 S245B-N263B 0.165284895931643 T249B-D259B 0.161206608587732 N239B-G262B 0.160933539178774 R242B-S261B 0.160870485836944 T249B-N257B 0.159793369986369 Y235B-H256B 0.150327475324147 L231B-T251B 0.149579688412063 N239B-D259B 0.136601440973187 W238B-I265B 0.135310615652363 I241B-G262B 0.118922464658762 S245B-I265B 0.114736935947083 L255B-L260B 0.11471001713908 Q237B-I244B 0.1144260880747 R232B-T251B 0.113687252860237 L231B-L248B 0.109409741359259 R232B-T249B 0.108509752371155 I234B-N257B 0.108132139143668 Q237B-L258B 0.106366978300141 Y235B-L255B 0.10379864751126 I244B-N263B 0.103370118239595 T251B-H256B 0.101004782025932 L231B-L236B 0.0937387399009511 S243B-T249B 0.0917513527862646 L236B-L255B 0.0888491837579068 G247B-S253B 0.0887635323612161 S245B-T251B 0.0883386808667275 S233B-L260B 0.0859478946864609 L258B-N263B 0.0848636876258326 S233B-T251B 0.0823527724685368 L236B-N263B 0.0790784085810028 S253B-L258B 0.0788810637145683 R240B-I265B 0.0778065246677686 R232B-D259B 0.077139452071588 Y235B-R240B 0.0761406894754533 N239B-I244B 0.0735039766737104 L248B-S253B 0.0718209439209128 I234B-T251B 0.0706262703085505 N239B-L260B 0.0701021694063098 D259B-D264B 0.0658171912215573 S254B-D259B 0.0561676963311653 W250B-H256B 0.0534233823402133 S233B-T249B 0.0522628660823554 I244B-S261B 0.0517878237386078 I244B-L258B 0.0476965842730173 L236B-S243B 0.0464980479054764 I234B-S254B 0.043308160222491 L248B-L260B 0.0432077067870749 S243B-G262B 0.0415675984271544 W238B-L258B 0.0400196161536606 T251B-N257B 0.0380282457928507 T251B-L258B 0.0364248633705051 I244B-D264B 0.032819519320523 I244B-T251B 0.0304542458730093 S233B-L255B 0.0270582109086455 I244B-W250B 0.0259301487418897 I234B-S261B 0.0172056860810166 L236B-L248B 0.0124567882475155 S245B-D264B 0.0101023251244603 T249B-L255B 0.00951671936350706 S243B-D259B 0.00918707592519671 Y235B-N263B 0.00871694735118078 Q237B-S243B 0.00583586703822725 Y235B-I241B 0.00567364326381492 I241B-T249B 0.00425577441944736 Q237B-N263B 0.00305921503898965 R240B-S261B -0.00330581895047111 L236B-D264B -0.00890669317881843 I241B-L248B -0.00891193360280251 W252B-L260B -0.00915013878728477 S233B-S253B -0.0110652415917785 Y235B-S254B -0.0143819337905882 Q237B-S261B -0.0181988370359565 I244B-T249B -0.0205608612649248 Y235B-S261B -0.0222976702511981 L248B-L255B -0.0240446703139447 L236B-T249B -0.0242588432061641 R232B-W252B -0.0243035589160165 R232B-S253B -0.0246062356478687 I234B-W250B -0.0288485547739485 I234B-S253B -0.0312266683890376 Q237B-D264B -0.0369135676238595 Q246B-I265B -0.0397526026680133 I244B-W252B -0.0417782447247448 L231B-D259B -0.0429199081790599 S233B-W250B -0.0439344803025894 W238B-I244B -0.044044780022451 Q237B-R242B -0.0450511416542669 S233B-D259B -0.0458468805052663 Y235B-W252B -0.0459236875356983 S243B-S261B -0.0471531181126994 W250B-L258B -0.0473482562047618 W252B-N257B -0.0474665920845186 S245B-W252B -0.0516998637405353 R232B-L248B -0.0518664973877085 I244B-D259B -0.0519873583843333 Q246B-T251B -0.0539554124373423 L236B-I244B -0.0580273352540552 Y235B-I244B -0.0605372329734002 Q246B-W252B -0.064347238382779 R232B-L260B -0.0650356672824608 Q237B-N257B -0.0678995692174582 L248B-L258B -0.0700911902511301 R232B-H256B -0.0703448681712743 L258B-I265B -0.0714300519147431 R240B-S245B -0.0724127531248169 S243B-D264B -0.0726277285924792 I234B-N239B -0.074135700399956 W252B-D259B -0.0777765960350338 L236B-I265B -0.0786994884378116 Y235B-T249B -0.07985419028457 Q237B-G262B -0.080799627507171 R232B-W250B -0.0837131853724347 L248B-D259B -0.0859432043433168 S245B-L260B -0.0864274609070126 I241B-Q246B -0.0887767866017484 G247B-L258B -0.0889921288731443 I241B-L258B -0.0929096712245117 L248B-I265B -0.0930853993064664 L231B-W250B -0.0936708437792495 N239B-D264B -0.0942482562880514 I234B-L248B -0.0952376518380236 Y235B-G262B -0.0956744711660495 N239B-S261B -0.0988056121656422 R242B-G262B -0.0999147867352361 W238B-D264B -0.101282908323982 W238B-S243B -0.102197870804955 I234B-G262B -0.103249722168818 G247B-L255B -0.10350393457496 R242B-L248B -0.103875750014805 I244B-G262B -0.106734104948641 W238B-D259B -0.107036535544592 T249B-L260B -0.108867961734746 S233B-L248B -0.112321198313123 L248B-N257B -0.115791507277436 R240B-D259B -0.118057847911548 D259B-I265B -0.129328866549535 S243B-L260B -0.129692699370323 L236B-W252B -0.131067656947195 I234B-N263B -0.142032925772963 R242B-L260B -0.142651983465125 I234B-I241B -0.144704399441143 S233B-W252B -0.147163649133337 L236B-R242B -0.147242810533902 L236B-S245B -0.152110955375955 R232B-N257B -0.155080023485878 I234B-I244B -0.166734404357103 I241B-D259B -0.167772143398767 N239B-L258B -0.168835181811926 T249B-L258B -0.178618565260669 Q237B-I265B -0.179399797379843 L236B-N257B -0.179922162104375 S243B-L248B -0.18630000709947 Y235B-L248B -0.187208811892312 G247B-W252B -0.190574089513209 L248B-S254B -0.190745629082485 L231B-H256B -0.195268731100404 T249B-S254B -0.207633971593094 I234B-L260B -0.208027471538994 L236B-I241B -0.208869811368235 R240B-D264B -0.214412762179395 L231B-T249B -0.22430590557255 L231B-L258B -0.229109099160331 N239B-I265B -0.249695105263974 W250B-N257B -0.251955769769513 W238B-N263B -0.254822137827813 L236B-H256B -0.257032901935013 S245B-W250B -0.260883830509056 I234B-H256B -0.261510410792647 R240B-L260B -0.266981249943822 R240B-N263B -0.292589406055187 S243B-N263B -0.307527544510998 S233B-H256B -0.309905593550658 W252B-L258B -0.335509185622417 W250B-L255B -0.33552060698646 I241B-D264B -0.335926398526365 I234B-W252B -0.338606215242656 L260B-I265B -0.350270043439624 I241B-S261B -0.352482447269509 I244B-L260B -0.353149429284284 L236B-G262B -0.358529223800398 I234B-T249B -0.375971706507007 I241B-L260B -0.385225725755443 R232B-S254B -0.396367002815866 S233B-S254B -0.424649381403961 S233B-N257B -0.493440839501985 R242B-D264B -0.755314800455308 N239B-N263B -0.803968844340031