[Mon Aug 29 17:27:59 2016] >Input file: TMQ86VZ5S1G.pdb >TM segments: A10-28_A64-76 MAIDEN score = -1.8631 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L23A-P28A 1.95959711330522 L22A-M27A 1.45545049263883 W13A-V18A 0.824815670686592 V10A-K74A 0.508503841604075 M27A-L66A 0.499394244479396 V10A-L73A 0.491870738820898 L22A-P28A 0.37511800141319 P15A-P28A 0.34173210570608 A19A-P28A 0.291797673096652 W21A-T72A 0.274775039326305 R65A-E71A 0.272694690691707 Q64A-T72A 0.246818013951935 V10A-E76A 0.24027352772594 V11A-I70A 0.215179583094223 N25A-L67A 0.201752332183509 P28A-L66A 0.196486895654044 V18A-L23A 0.192893745399832 V11A-L73A 0.184116313172555 K16A-E24A 0.183325067949863 I70A-M75A 0.175993637293818 V11A-E76A 0.175113668531502 D68A-L73A 0.170714141575665 V11A-M69A 0.169599952311559 P15A-L22A 0.16511866680922 W13A-L22A 0.163348984635145 L66A-K74A 0.162842751569646 V18A-A26A 0.160349141315431 P15A-W21A 0.152743060914984 E24A-I70A 0.146569908068092 V10A-E71A 0.133680036098948 N25A-E71A 0.130000693498385 V18A-L73A 0.129070600863455 K17A-L22A 0.125647636059128 N25A-I70A 0.124065095493889 V11A-K16A 0.122440357801625 N25A-L73A 0.118787745972065 R65A-T72A 0.116124199162494 W21A-L66A 0.114095432290022 R65A-I70A 0.111757913393265 V11A-K74A 0.111196886005893 P28A-M69A 0.108138962699238 W13A-K74A 0.107614904901723 L23A-L66A 0.0985562221096412 V11A-M75A 0.0972771785074062 W21A-K74A 0.0924896021611872 R65A-L73A 0.0853288926333664 L22A-D68A 0.08511367775069 M27A-I70A 0.0825417749862707 L22A-L67A 0.0812176528140931 A19A-E24A 0.076515938545791 D20A-N25A 0.0764926969638875 M27A-E71A 0.0749737735374263 L22A-Q64A 0.0732397765898245 S14A-L22A 0.0694291982097273 E24A-M69A 0.0648762007103223 P28A-L67A 0.0620644445350251 V10A-P15A 0.0618248047581699 P28A-R65A 0.05873659383378 V10A-K16A 0.057296709776556 N25A-D68A 0.0551420224795254 M27A-Q64A 0.0550449070151241 L23A-I70A 0.0515467036027124 V11A-V18A 0.0476977822441071 L23A-R65A 0.045708747774996 A19A-L66A 0.0456587960203416 W21A-P28A 0.043173977057286 L66A-E71A 0.0387119228907293 A19A-I70A 0.0375255447393688 M27A-L67A 0.0351869170406722 L22A-T72A 0.0346714853527592 V18A-N25A 0.0334436812818282 W21A-E71A 0.0321990912572105 N25A-L66A 0.0267932711303516 V11A-T72A 0.0256033067704413 E24A-T72A 0.0247547095226697 A26A-D68A 0.0244751060612092 V11A-L22A 0.0207720885480196 Q64A-L73A 0.0201950850486226 W13A-I70A 0.0189820781124652 V18A-P28A 0.017233699266388 V10A-L22A 0.0162181476204708 V11A-A19A 0.0153383469470922 V11A-E71A 0.0145572825902924 D68A-M75A 0.0103580345720027 A19A-M69A 0.00576027954599878 W13A-D20A 0.0051605441173399 D20A-P28A 0.00441444032845606 W21A-L67A 0.0034662927349336 M69A-M75A 0.00202745023704809 V10A-L66A 0.000649861844599364 M27A-L73A 0.000470721055573442 K17A-E24A 5.54898654030467e-05 A26A-I70A -4.10991979631348e-05 N25A-M69A -0.000786244509010992 A26A-Q64A -0.00277630192922884 Q64A-I70A -0.00579623631254034 V10A-K17A -0.00585924326127252 S14A-L73A -0.00791045904247678 Y12A-K74A -0.011708863845084 E24A-L66A -0.0125242334861692 N25A-T72A -0.0133841572682507 A26A-L67A -0.0205868288830553 M69A-K74A -0.0237218548495095 V10A-A19A -0.0256724162224824 Y12A-W21A -0.0273148291781083 S14A-D20A -0.029982572703743 V10A-M69A -0.0305366258065054 W21A-M27A -0.038512694834145 K16A-L23A -0.0413380454715915 D20A-M69A -0.0423609507755778 V18A-M69A -0.0426022452213988 Q64A-E71A -0.0501182217926854 L66A-M75A -0.0519530384914484 L22A-L73A -0.0572328979029439 Y12A-L73A -0.057532343896634 V10A-L67A -0.0629812359732114 A19A-N25A -0.0660650260620421 W21A-D68A -0.0680189491483145 Y12A-A19A -0.068078771625772 K17A-I70A -0.069199672505615 D20A-I70A -0.0700496394385963 L22A-E71A -0.0740281167229204 M27A-M69A -0.0748998549561137 V18A-L66A -0.0751039147604544 W21A-L73A -0.0752082794600808 V10A-D20A -0.0752874171134934 P28A-I70A -0.0779738245488719 L23A-M69A -0.0797209063655333 M27A-R65A -0.0808420580304681 E24A-L73A -0.081827835914327 N25A-Q64A -0.0821622064944316 V18A-I70A -0.0848840532621518 D68A-E76A -0.0926511402418679 Y12A-I70A -0.0955531552275914 V11A-W21A -0.095680090690943 M69A-E76A -0.0972716754904877 P28A-Q64A -0.0984223907010149 K16A-M27A -0.100764126051023 D20A-L66A -0.106112818096362 V18A-L67A -0.107174116713345 W21A-A26A -0.110264210283992 A19A-L73A -0.112281902058786 K17A-N25A -0.114300963651957 E71A-E76A -0.115522414761766 P15A-L23A -0.116662632701117 S14A-W21A -0.117120717739778 Y12A-E76A -0.117328498528245 K17A-L73A -0.117998320090083 V10A-E24A -0.120096693563842 K16A-P28A -0.122455632999604 K17A-P28A -0.124024917627138 V18A-K74A -0.128156711936566 A26A-M69A -0.129353671768129 L22A-M69A -0.132251275584293 V18A-E71A -0.132586151929206 A19A-A26A -0.13261843940038 L22A-R65A -0.133142876838772 L67A-M75A -0.13390878877079 W21A-R65A -0.137344858973838 W13A-A19A -0.137594249191978 L67A-T72A -0.138763016353417 V18A-T72A -0.140804951754038 V10A-M75A -0.149750549729155 V10A-I70A -0.150232500088514 V10A-V18A -0.153652311089456 D20A-L73A -0.154352495302971 L67A-E76A -0.156261550105289 K17A-A26A -0.158922482244042 W13A-E76A -0.163793609938699 A26A-L66A -0.165877112337139 D20A-M27A -0.167249957259677 W13A-L73A -0.169608707662269 V18A-M27A -0.172575554884413 K17A-M27A -0.173787239261264 L66A-L73A -0.173917054692856 M27A-D68A -0.174031656925119 E24A-R65A -0.174723662216516 D68A-K74A -0.176943542383415 K16A-L22A -0.187483716423508 V11A-K17A -0.189726158099282 I70A-E76A -0.194332772349574 A26A-R65A -0.194451157090563 L67A-K74A -0.197628031470756 K16A-W21A -0.198405182778326 N25A-R65A -0.209824023707757 Y12A-D20A -0.213450322448995 Y12A-K17A -0.213480451735204 V10A-T72A -0.224372963366298 L66A-T72A -0.22608036455192 R65A-K74A -0.226180637757105 D20A-A26A -0.226446735784543 E24A-D68A -0.233818543830793 K17A-L23A -0.234798721208215 V10A-D68A -0.244904623221237 Q64A-M69A -0.250422786863912 V10A-W21A -0.26789869871183 S14A-A19A -0.272856008426032 V11A-D20A -0.277278151374818 W13A-W21A -0.279552045340204 A19A-M27A -0.309780846067411 P15A-D20A -0.325769897171079 W21A-I70A -0.333736069441491 V18A-E24A -0.33815447005238 L22A-L66A -0.34913834951972 Y12A-V18A -0.378082906963642 L22A-I70A -0.403131977545377 L67A-L73A -0.428262403331211 W21A-M69A -0.435803245978877