[Mon Aug 29 17:29:20 2016] >Input file: TMQ86YK3M1G.pdb >TM segments: 87-97 MAIDEN score = -0.3790 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A91 -L97 0.117186320880996 S90 -I96 0.117115809825265 S90 -S95 0.08513400147769 S90 -L97 0.0699909355269863 K92 -L97 0.0186260927418074 V88 -V94 0.0105957963027192 V88 -G93 -0.0193095560674323 F87 -G93 -0.0529589544609269 R89 -I96 -0.110470365074574 R89 -V94 -0.135977169164791 F87 -K92 -0.162416328131285 A91 -I96 -0.316507372380483