[Mon Aug 29 17:29:37 2016] >Input file: TMQ86YK3M3G.pdb >TM segments: 56-71 MAIDEN score = -3.0660 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D59 -F64 0.503386831322317 D63 -C68 0.390666291215156 N60 -C68 0.247529985622312 F61 -K66 0.180471480510073 S58 -K66 0.177844005937066 W57 -F64 0.116210508965132 L56 -V65 0.0982358037272477 D63 -K71 0.090454473902447 N60 -K66 0.0695369925194376 N60 -Q67 0.0619645492971694 S58 -Q67 0.0503088422202218 D59 -Q67 0.0437513278804718 S58 -V65 0.0370684096607263 T62 -V70 0.0337019861068395 W57 -K66 0.0312568910259881 V65 -K71 0.0271490216175275 W57 -T62 -0.0179370148423543 W57 -D63 -0.0411423687084512 F61 -Q67 -0.0443043997774692 L56 -K66 -0.065363671077435 L56 -D63 -0.0824804960386381 S58 -F64 -0.0887938586380614 D59 -L69 -0.0898969246953829 D63 -L69 -0.0964547233508606 K66 -K71 -0.0991829224720329 S58 -D63 -0.103196698718691 N60 -L69 -0.115225042804082 F61 -V70 -0.116012511564937 L56 -F64 -0.117330944779029 N60 -V65 -0.126414117076149 D63 -V70 -0.14300736147744 F61 -C68 -0.150365362037953 T62 -Q67 -0.152508612320112 F61 -L69 -0.160232519720482 L56 -F61 -0.171471838514043 D59 -K66 -0.177004369362436 W57 -V65 -0.187045738126758 T62 -L69 -0.218322903147859 D59 -C68 -0.219405156258119 L56 -T62 -0.266463952174753 V65 -V70 -0.286525317773758 F64 -V70 -0.290608791442731 D59 -V65 -0.293222161328033 F64 -L69 -0.367130892683186 F64 -K71 -0.379993722917962 T62 -C68 -0.558527962888096