[Mon Aug 29 17:29:53 2016] >Input file: TMQ86YK3M5G.pdb >TM segments: 56-73 MAIDEN score = -3.2799 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D59 -F64 0.545870123775823 D63 -C68 0.515029908588652 W57 -T62 0.455670748696489 N60 -C68 0.26216549583045 K66 -K71 0.221562095507087 W57 -K66 0.214551049457206 S58 -Q67 0.120705808872628 L56 -T62 0.117985874057489 D63 -K71 0.11184185272599 D63 -V70 0.105781858803487 L56 -V65 0.0753687384265587 N60 -Q67 0.0725762366095888 S58 -K66 0.0573915143239296 D59 -Q67 0.0307582703170914 V65 -K71 0.0258845399209429 F61 -K66 0.0202714965220308 F61 -L69 0.0188034517915554 L56 -D63 0.0109879192827822 K66 -S72 -0.00725875128571074 Q67 -S72 -0.0382544924743952 N60 -K66 -0.0472876346673297 S58 -D63 -0.0497842795034018 C68 -P73 -0.0560185869360669 W57 -D63 -0.0567756297169014 L56 -K66 -0.0615136826917864 F61 -Q67 -0.0719810646792247 V65 -P73 -0.0722345540032425 T62 -V70 -0.0765952457243653 S58 -F64 -0.0786821380052558 L56 -F61 -0.0862635630835911 N60 -L69 -0.0872966427395592 W57 -Q67 -0.0880183399277588 T62 -Q67 -0.0950834258627054 V65 -S72 -0.110312318504886 L56 -F64 -0.117175239238043 F61 -C68 -0.121875421112568 K66 -P73 -0.125132073505297 D59 -L69 -0.130737949438547 N60 -V65 -0.139614786744472 F61 -V70 -0.147786301705613 D59 -K66 -0.173436137334507 W57 -F64 -0.200798035887122 D63 -L69 -0.239809254546202 W57 -V65 -0.273390203483912 T62 -L69 -0.274790740689926 D59 -C68 -0.281590242461701 D59 -V65 -0.28864684315764 V65 -V70 -0.288889907206899 F64 -V70 -0.301373091077212 F64 -L69 -0.32249957979448 S58 -V65 -0.336300859429744 F64 -K71 -0.338421410699255 T62 -C68 -0.53525822875935 Q67 -P73 -0.542256606645003