[Mon Aug 29 17:30:23 2016] >Input file: TMQ87978M1G.pdb >TM segments: 50-77_ 115-137 MAIDEN score = -19.2117 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I71 -K76 0.602370480394168 Q65 -K73 0.439898927949951 V58 -V119 0.413140925535698 K62 -A70 0.352954340071523 R55 -N125 0.345319494394588 Q51 -E131 0.326059041994043 R117 -L122 0.31235837990431 R67 -K73 0.29985571939438 Q50 -E123 0.282081250146325 R117 -E123 0.278766441280571 T57 -E123 0.278121731452943 R55 -N63 0.27543772284785 T61 -T66 0.268598955719936 R55 -Q65 0.244502136586818 Q50 -Q128 0.228653990605346 Q51 -Q134 0.2261609047468 Q128 -Q137 0.21286702063435 W59 -T66 0.209337174993822 Q51 -Q118 0.205619898522662 L129 -Q134 0.202781780481395 R117 -N125 0.202559739145052 R55 -K62 0.200291245859233 E52 -A124 0.191936173457895 R55 -E123 0.187362662476751 T61 -W115 0.184547375159805 E72 -D77 0.182667282610603 E116 -F121 0.180736226482301 Q50 -R55 0.165287359515947 T66 -E116 0.164017345648555 L54 -K62 0.163210285186704 V58 -A124 0.162569873201188 T69 -D77 0.160716685077362 N63 -D120 0.155081757673821 E123 -E131 0.150092456466358 A70 -D77 0.142146812986368 T57 -T66 0.140040546028665 E116 -N125 0.133109800860612 Q51 -L56 0.132399541841622 N125 -A133 0.130554799422969 N63 -E72 0.128617117059113 E52 -N125 0.126846793235619 K62 -Q118 0.125453490513004 G60 -E116 0.124823156881162 Q65 -E116 0.117581157411657 L64 -T69 0.115095638142574 F121 -Q128 0.111166735927258 L53 -A124 0.108940229612525 E123 -E132 0.100277086877927 R55 -E116 0.098749348673405 R55 -Q118 0.0970905109511242 A124 -E132 0.0929253888096664 W115 -L122 0.0917466893327012 L56 -Q65 0.0878469420504457 E123 -L129 0.0860815751486416 G60 -V68 0.0849157717591797 E116 -L122 0.0846864709993393 T66 -Y74 0.0844627670950837 Q65 -R117 0.0829315405024933 L54 -F121 0.0810171759685512 T69 -E116 0.0765127115493769 Q118 -N125 0.0762870196848746 K62 -F121 0.0759478195629386 E52 -G60 0.0749840868770193 V58 -V68 0.0728988767356498 E52 -L122 0.0702207525954661 R55 -Q128 0.0675696966378999 L53 -L130 0.0672744128131129 E52 -E131 0.0647500017049075 T57 -V119 0.0624530078243375 V58 -Q118 0.0619303660100545 N63 -A70 0.0595150309873413 L122 -L130 0.0539277442342945 V58 -R117 0.0532991664197536 Q51 -A124 0.0525779782995681 K62 -R117 0.0522882841210839 T61 -I71 0.0516074602297909 L53 -I126 0.0503052094978638 E116 -A124 0.0482176030605288 T66 -K76 0.045092533134774 D120 -Q128 0.0444800832413852 V58 -E116 0.0430568277649517 G60 -V119 0.0414188901830164 T57 -Q118 0.0413493345622618 L54 -E123 0.0413140595000687 Q50 -L129 0.0410862746785057 Q51 -D120 0.0409104147875428 R67 -K76 0.0405315465651883 L53 -V119 0.0401559704567873 Q65 -V119 0.0377989947072592 T57 -N63 0.0349074779062203 L54 -D120 0.0326036902469458 L64 -E116 0.0277659620895436 W59 -F121 0.0273606724665498 Q128 -A133 0.0255422167147534 T61 -E72 0.0250475975103539 L56 -E123 0.0238557389850389 Q118 -I126 0.0235744937752949 N125 -L130 0.0231837065658156 R67 -L75 0.0214797177364803 Q51 -T61 0.0213898878460104 W59 -R67 0.0198385761120288 R55 -R117 0.0191793932399933 T127 -Q136 0.019165909968569 Q118 -T127 0.0186396060806056 R55 -G60 0.0163686398581482 Q51 -G60 0.0157368700823861 T61 -D120 0.0152272615333677 L64 -E72 0.0141784146486534 Q65 -W115 0.0138856886618514 Q51 -V119 0.0130740662827618 K62 -E123 0.0112866470099326 V58 -L122 0.00868203840950699 T69 -Y74 0.00782974778309731 K62 -V68 0.00766249083516612 V119 -Q128 0.00675592307925732 Q51 -I126 0.00671392186049147 V58 -F121 0.00645730749654627 Q51 -E132 0.005083390169899 Q65 -D120 0.00326854191040971 R55 -F121 -0.00137072780197856 E52 -Q128 -0.00146332768201107 Q50 -V119 -0.00170979350693923 V58 -T66 -0.00487460673110984 I71 -D77 -0.00658119529370893 N125 -E132 -0.00714835952593695 Q51 -A133 -0.00841454063101965 L56 -I126 -0.00952142951834833 T61 -V119 -0.0110126797991557 T66 -K73 -0.0113003056572554 W59 -W115 -0.0121828534945578 G60 -T66 -0.0165441063757918 Q50 -V58 -0.0175698530165089 D120 -N125 -0.0181663396029901 Q50 -E131 -0.0196970777051095 L54 -A124 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-L130 -0.179840170200865 K62 -T69 -0.181067716241929 R55 -W115 -0.184050809531547 L122 -L129 -0.187919103433493 V119 -I126 -0.188017760353685 E116 -E123 -0.197528475757005 R55 -L122 -0.19793497036194 E52 -T61 -0.198445308573414 Q51 -Q128 -0.203571028714547 E52 -T127 -0.204627219739727 Q118 -A124 -0.2049704941693 T127 -Q134 -0.205562747254908 W59 -L64 -0.206342358451972 L129 -Q136 -0.210275458799142 A124 -L130 -0.211916130658401 Q50 -I126 -0.217117961959085 V58 -E123 -0.217536446110533 Q50 -T57 -0.219119630683278 Q65 -K76 -0.219795034585615 R55 -A124 -0.220460378292649 T127 -A133 -0.220577513232673 L56 -K62 -0.223382829903204 V58 -D120 -0.223511183055801 R117 -A124 -0.223628580557148 L56 -V119 -0.227126123533709 L54 -W59 -0.231391011570894 E123 -Q128 -0.23656843689869 L64 -A70 -0.237046281247235 L54 -T61 -0.239476457750497 Q51 -L122 -0.239948722935121 N63 -W115 -0.241307335924788 K62 -V119 -0.243815935525727 L130 -Q137 -0.255935007530666 T57 -L64 -0.257748360430176 F121 -T127 -0.263473543932801 L56 -T61 -0.265882471413909 V68 -L75 -0.269297602877968 E131 -Q136 -0.272855572534428 T61 -T69 -0.274977812308638 Q128 -I135 -0.276935034358414 I126 -A133 -0.277242831315884 V58 -R67 -0.27889598409981 E52 -V58 -0.279670737004628 Q118 -E123 -0.28301980387405 E132 -Q137 -0.288312578902944 V119 -N125 -0.28848892275497 Q51 -V58 -0.290003256838443 N125 -E131 -0.295628161483554 K62 -W115 -0.301225479510194 L122 -T127 -0.302806787677078 A124 -L129 -0.303165864238902 Q51 -E123 -0.305170525795897 V58 -W115 -0.32726939849954 R55 -I126 -0.329201572005823 L122 -Q128 -0.329410472486838 L54 -V119 -0.330456263095241 F121 -I126 -0.335380634497846 L53 -W59 -0.337027324657803 L54 -G60 -0.346830709575638 Q128 -Q134 -0.346981335200143 W59 -V119 -0.378796643023889 L130 -I135 -0.384001423863 V68 -Y74 -0.386520945745144 W115 -F121 -0.392376234219349 L129 -I135 -0.392918679835796 L64 -I71 -0.394044049028474 Q50 -L56 -0.414379493291538 V58 -Q65 -0.421222093041023 V119 -A124 -0.428809797258639 L53 -V58 -0.45572963873418 L130 -Q136 -0.493575758485486