[Fri Aug 26 17:43:01 2016] >Input file: TMQ89607S4D.pdb >TM segments: 74-99_ 220-233 MAIDEN score = -3.3624 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A77 -D84 0.652788511786333 L93 -P228 0.593424286310866 L93 -P229 0.497098167067691 D89 -F94 0.496341523408902 K99 -P229 0.441974833832165 N80 -K88 0.430138988588782 V90 -E95 0.408956890653106 L93 -F231 0.400049683513144 N80 -Q85 0.373422311191034 F94 -P228 0.359193382815826 W91 -P228 0.352508002636339 E95 -F231 0.339884398100887 L93 -G230 0.320741921614859 D79 -D89 0.247180381071174 W78 -T87 0.239208441680642 E95 -G230 0.232508682716598 T96 -P228 0.228435207551412 T87 -E95 0.198156399091552 T81 -D89 0.189871157755816 F94 -F231 0.181513561001638 T81 -A86 0.172017698197104 Q85 -V90 0.16938538814638 E95 -P228 0.168663356392029 Y225 -F231 0.16262306983271 D79 -K88 0.160299469515929 T96 -P229 0.158945530101176 D89 -P228 0.148707949545614 L93 -C226 0.13968923311504 W91 -P229 0.136800874855756 T87 -T96 0.13519259370546 A77 -K88 0.133046522563236 S97 -C226 0.127358647025699 D76 -V82 0.123668495386593 S97 -P229 0.12346973626611 L93 -L233 0.112886194479464 S97 -A232 0.109632852226418 V90 -A227 0.107731217647102 D76 -T83 0.104222815774297 W78 -D84 0.098068610442299 D84 -W91 0.0966951198919448 K88 -L93 0.0956236792480869 T83 -W91 0.095181468654177 S92 -I98 0.0929930154225698 W78 -K88 0.0911110674709081 V90 -A232 0.0908497594235322 T96 -Y225 0.0885737821402227 E95 -A227 0.0877477239738838 K88 -T96 0.0824241704258046 I98 -G230 0.0815194818075877 F94 -P229 0.0784243700942531 A74 -V82 0.0754877386338642 L93 -K99 0.0723522941811354 A86 -G230 0.0707466854555467 D79 -D84 0.0651789663797604 R222 -A227 0.0639921341426184 S92 -K99 0.0625465522214603 A86 -F231 0.0589717481196086 S92 -S97 0.0569306633656068 F75 -T83 0.0558814844671707 A86 -A232 0.0536030489805996 D89 -P229 0.0501499584784795 D79 -T87 0.0486272985283955 E95 -P229 0.048289332481946 A227 -L233 0.0478861553377081 A77 -A86 0.0453227321735305 D84 -S92 0.0446986167019736 F94 -K99 0.0444233831367669 A86 -F94 0.0421387475723085 F75 -T81 0.0402309543801724 F94 -G230 0.0393764894758029 V90 -S97 0.0366331396589055 R224 -P229 0.0362982965918559 F94 -C226 0.0339681631805897 T87 -A232 0.0325025203232781 A77 -Q85 0.0225831519575501 F75 -D84 0.0182420809834256 D89 -S97 0.0175499289291554 A86 -P228 0.0173394258219064 A86 -L233 0.0148268503842797 A74 -D84 0.0135939591311414 I98 -P228 0.0115681020842515 K99 -G230 0.0115361295827529 F223 -P229 0.0106609047752937 C226 -A232 0.0103655291918745 A74 -Q85 0.00750799620224163 T87 -L233 0.00217140203291555 W78 -Q85 0.0010892933186244 F94 -A232 -0.00438803313875491 W91 -G230 -0.00444922846222973 T81 -V90 -0.00620402008420262 D89 -G230 -0.00663718249911138 F75 -V82 -0.00878252519812195 Q85 -L93 -0.00895936030048006 T87 -F231 -0.0108967062073937 W91 -F231 -0.0115166764222074 I98 -Y225 -0.0274077892115656 T83 -S92 -0.0293838774508801 D84 -D89 -0.0295553980298635 F94 -L233 -0.0328667656580723 V90 -L233 -0.0343960166399366 F94 -A227 -0.0344754917515822 T96 -C226 -0.0410398431458523 V90 -P229 -0.0435831430431914 T96 -A232 -0.0437603722546147 S97 -F223 -0.0489471527335104 K99 -Y225 -0.0495300631238296 S220 -Y225 -0.0518160887476156 I98 -R224 -0.0543724076604448 V90 -G230 -0.0575245037793586 W91 -T96 -0.0580596546793002 C226 -L233 -0.0588702032858883 Q85 -W91 -0.0596976665376709 A86 -E95 -0.0657469527855312 A77 -T87 -0.0658098572964279 Y225 -A232 -0.06665839605781 Y225 -G230 -0.0690945551752062 D89 -A232 -0.0694656248922429 D79 -A86 -0.0730196835499699 A86 -W91 -0.0730293453092632 Q85 -F94 -0.0747273071053722 S97 -P228 -0.0757302375219622 D76 -Q85 -0.0772876319095628 K88 -E95 -0.0787724803525101 W78 -A86 -0.081490712510325 D79 -Q85 -0.0827189852624188 S97 -R224 -0.0829820171609832 I98 -A227 -0.0830980023494821 N80 -A86 -0.0840379346756026 Q85 -S92 -0.0903159794869688 V90 -T96 -0.0911278079027955 S97 -F231 -0.0949667351242605 S92 -F231 -0.0969312132430808 S97 -G230 -0.101575733423738 D76 -T81 -0.10188601060177 S92 -A232 -0.102012435349601 Q85 -F231 -0.103805773176786 F94 -Y225 -0.106518311463594 F75 -N80 -0.107434789068725 W91 -A232 -0.10900754051045 A74 -T83 -0.109583791817594 V82 -V90 -0.109616084109697 T96 -A227 -0.111367071021778 D89 -E95 -0.112527884220532 W91 -A227 -0.11806911067425 C226 -F231 -0.123069722932027 S92 -A227 -0.126865505902889 N80 -T87 -0.130000690805862 W91 -I98 -0.132075375865707 D89 -L233 -0.133328799515106 V82 -D89 -0.13336866939401 V90 -F231 -0.133659737587143 K99 -A227 -0.139817245806579 V82 -W91 -0.141146368154695 L93 -I98 -0.144131235466191 A74 -T81 -0.144763850201223 I98 -C226 -0.146304939213307 I98 -F223 -0.146663941307035 L93 -Y225 -0.146858653514372 N80 -D89 -0.149071587076024 T83 -K88 -0.149957176061798 S92 -P229 -0.151627673143562 T87 -F94 -0.153389456914223 S92 -G230 -0.153963217770044 A74 -D79 -0.15744691881924 T83 -D89 -0.160121397364418 D76 -D84 -0.163115510017641 D89 -F231 -0.173358017669829 D84 -L93 -0.177417682261109 P228 -L233 -0.180424533793833 K99 -R224 -0.18542686431334 V82 -T87 -0.188827443391041 T96 -F231 -0.194744649658239 K88 -F94 -0.195523102767688 A86 -S92 -0.209251762128771 T96 -G230 -0.212909640768529 V82 -K88 -0.214467557702137 V90 -P228 -0.217005882913766 K99 -P228 -0.224043709232165 D89 -T96 -0.224779353604012 T87 -L93 -0.228887697793243 W91 -S97 -0.230679137831431 A227 -A232 -0.235745571179464 A74 -N80 -0.239085002279509 T81 -K88 -0.239862546907625 K99 -F223 -0.264372685301563 T83 -V90 -0.266058183396593 L93 -A232 -0.275024048550355 L93 -A227 -0.276277574276744 A86 -L93 -0.276669213413691 S97 -Y225 -0.277510394213331 T87 -S92 -0.281701959309531 I98 -P229 -0.282455676746962 S92 -P228 -0.291893476674378 D84 -V90 -0.299373942051401 W78 -T83 -0.310273715665067 A77 -V82 -0.322477354377141 K88 -F231 -0.346681107213241 S97 -A227 -0.368087523759314 T81 -T87 -0.370772637945103 A77 -T83 -0.374242802575755