[Mon Aug 29 17:39:22 2016] >Input file: TMQ8BG19M1G.pdb >TM segments: 535-576 MAIDEN score = -12.4308 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V543 -D548 0.949766988701389 V543 -F549 0.800103528519777 L539 -L556 0.698746506339424 V543 -W553 0.668943760190991 F549 -A576 0.588176693023998 I558 -R565 0.569951304038024 Q560 -A569 0.568528964324582 A542 -F549 0.558919017559508 A535 -V559 0.52022201346063 L539 -W553 0.514534879209018 A550 -T575 0.495655893807265 S540 -L556 0.48680175683053 M554 -S572 0.469847387452439 W553 -Y573 0.464878349718808 V559 -A569 0.415051281249766 G557 -Q571 0.378633395820414 V559 -R565 0.375314503222622 L556 -A569 0.35905107478409 A542 -P547 0.353955593008996 V543 -Y573 0.343332042368401 A551 -A576 0.340415982173553 E536 -Q544 0.332370231908721 A535 -G557 0.323802660878794 L556 -S572 0.322803015366055 L556 -E568 0.289731744487349 L539 -N555 0.287310650959051 E568 -R574 0.286203411465423 N555 -E567 0.276107919672959 E537 -Q560 0.270489839222115 P547 -Y573 0.256681200853623 S540 -Q560 0.254112624336673 I558 -A569 0.250133467235795 K564 -S572 0.226616025515884 G557 -E568 0.217005981841367 D548 -A576 0.20472862150232 E568 -Y573 0.200623191256652 M554 -A576 0.200322526210962 N561 -R574 0.200130603950742 L539 -P547 0.200093461237097 E568 -A576 0.198761812120239 L539 -V559 0.198713096980343 R565 -Y573 0.196452130794635 N555 -L563 0.196102789617274 N555 -R574 0.19409487885367 N555 -S562 0.191562822095078 E537 -L556 0.187348145835061 S540 -G557 0.179305269617204 N555 -T575 0.177109720956153 L556 -K564 0.175964072818051 A551 -R574 0.175658917107786 V559 -E570 0.174760126426539 P547 -S572 0.173793578718085 N555 -Q560 0.169113478839447 M554 -T575 0.159321627956681 L541 -Q546 0.154070631259626 L538 -G557 0.149645213668075 Q546 -T575 0.138337203555061 G557 -E570 0.138055801829085 L539 -Q544 0.136552284469372 W553 -N561 0.136477114203684 A550 -Q571 0.134216808156702 S540 -E568 0.131493238986103 A550 -A569 0.130630870942807 V543 -L556 0.130020969358197 S540 -A551 0.128249526339315 E537 -G557 0.126895022626529 A552 -Q560 0.125940382451367 A552 -R574 0.124471514338361 E567 -T575 0.123893195825968 A535 -A551 0.123168825334376 F549 -R574 0.123070920135047 Q560 -R574 0.122415557271966 E536 -A569 0.121428773205565 L539 -Y573 0.121199391907143 A551 -V559 0.119759307084141 Q544 -F549 0.119549481508695 L556 -Y573 0.119207383419092 E536 -E568 0.11795286306836 S540 -A552 0.116796650092958 A552 -A576 0.113750119167563 L563 -E568 0.113417338299783 V543 -A552 0.112034370045443 E537 -Q544 0.108818649542457 L539 -S572 0.108243406624241 A542 -M554 0.104863223932089 A551 -A569 0.104571346739622 S562 -Q571 0.104379141767755 A535 -V543 0.103620612333919 P547 -G557 0.103001188088359 L539 -L563 0.101930073101521 A542 -A552 0.101737363744109 A550 -A576 0.101466988279523 E536 -V559 0.0987374239556598 Q560 -F566 0.0984650047428355 L541 -A551 0.0975507164403602 Q546 -A576 0.0967783579182266 M554 -E570 0.0964773427129582 L539 -A576 0.0961765325008699 A542 -G557 0.0960678350256878 L541 -M554 0.0957116342411162 L538 -V559 0.0955002764842563 P547 -R574 0.0944537002866475 R565 -R574 0.093431918653843 E537 -A542 0.0920092863036386 L563 -Q571 0.0918450693193624 A552 -A569 0.091330679630703 V559 -T575 0.0909617027099605 Q544 -A551 0.0896863038895077 S540 -A550 0.0856909876861724 N561 -Q571 0.0830723434654617 Q544 -S572 0.0825917949802357 I558 -T575 0.0814462511786935 S540 -T575 0.0801515807595267 L538 -W553 0.0770635145801792 S562 -Y573 0.0767674940742022 A535 -M554 0.076726652383976 E568 -T575 0.0754834580421546 R565 -S572 0.0747580199593246 K564 -A569 0.0745370224988839 I545 -A551 0.0743303681823546 L538 -M554 0.0725849732415451 M554 -E568 0.0724573904090797 D548 -S572 0.0696043782042532 V543 -T575 0.0689967826591985 L556 -R574 0.0689359140765393 A542 -A576 0.0674988944039301 F549 -Q571 0.0668969078063224 I558 -Y573 0.0665051659461433 L538 -I558 0.0659983277741536 V559 -Y573 0.065761737466504 L541 -W553 0.0648934434132302 A535 -N561 0.0618456155078198 Q544 -A550 0.0592751947214272 P547 -T575 0.0586101969656889 P547 -N555 0.0579131117972871 S540 -S572 0.0560357960301987 A535 -A569 0.0557901949699635 A542 -I558 0.0555109293303948 I558 -A576 0.0535019313942975 W553 -T575 0.051587062716699 W553 -A576 0.0472947049015437 I558 -K564 0.0469862491748056 F549 -G557 0.0455222795843913 S540 -D548 0.0450343377512809 M554 -F566 0.0449668445164416 I558 -F566 0.044903837299479 F549 -M554 0.0447858546437541 I558 -R574 0.0441242442737044 L538 -Q560 0.043622270638342 L541 -A550 0.0426477219498391 Q546 -S572 0.0426414958537542 L541 -D548 0.0414857429452953 S540 -V559 0.040180818304913 E537 -I545 0.0393181407168646 L539 -M554 0.0370748836869557 S540 -Q571 0.0362153610548837 P547 -M554 0.0361336170504765 L538 -Q546 0.0348134339239827 I545 -W553 0.0346283290641645 A550 -V559 0.0333299275505246 E537 -N555 0.0332610756312488 L539 -A569 0.0327443587049465 Q546 -A551 0.0279788685645324 L539 -D548 0.0278065746736402 L556 -N561 0.0275044708326329 N555 -Y573 0.027294099368484 S562 -E568 0.0249135988291274 A550 -G557 0.0233488403697883 A552 -Q571 0.0217222195545164 E537 -I558 0.0207415695186235 L541 -F549 0.0205675747320322 W553 -F566 0.0202136234211592 V559 -E567 0.0184304051497455 A535 -Q560 0.0184043887653385 L539 -A552 0.0156612212733909 A569 -R574 0.015574049191903 L556 -R565 0.0143301506530822 N561 -E568 0.0126665865903544 A550 -I558 0.0117117635905988 A535 -S562 0.0111135344634996 S562 -S572 0.00914337281967925 W553 -E567 0.00501883386789004 L538 -P547 0.00445050657704993 V543 -A569 0.00168769786957856 W553 -R574 0.000589936586236628 D548 -G557 -0.000210350506630208 A552 -S572 -0.00171412229140799 Q560 -A576 -0.00429412665013051 G557 -K564 -0.00504253213882189 Q544 -L556 -0.00564970038561352 V559 -Q571 -0.00628761337845463 D548 -Q571 -0.00722059638107631 L556 -E567 -0.00908729259138663 L563 -E570 -0.010027588730306 L541 -S572 -0.0107033696002912 N555 -R565 -0.0108088302525813 F566 -R574 -0.0110956278234062 A551 -Q571 -0.011497195341347 A542 -S572 -0.0115730815749338 L563 -A569 -0.0119152592532625 E567 -R574 -0.012562507172144 A535 -A552 -0.0144406389891234 E536 -K564 -0.0153177077328095 F549 -L556 -0.0157620692429958 V559 -A576 -0.0173846610934221 E536 -S562 -0.0178447999589864 N555 -Q571 -0.0179006968643334 R565 -E570 -0.0182424400846088 V543 -Q560 -0.0186596560691408 L538 -L556 -0.0195070381356799 L541 -A552 -0.0212008303576483 E537 -Q546 -0.0236336747902689 N555 -N561 -0.0239563583357789 N555 -E570 -0.0243226849101732 Q560 -T575 -0.0245999331938711 E537 -M554 -0.0247516030418273 V559 -E568 -0.0255581831117553 F549 -I558 -0.0256586799279024 N555 -F566 -0.0267832697831185 R565 -Q571 -0.0286949057967871 L539 -A550 -0.0292575031514133 E567 -A576 -0.030828474577741 A552 -N561 -0.0311072409142912 W553 -S562 -0.0314455140211882 Q546 -L556 -0.0318129212265541 A551 -E570 -0.032589104169686 K564 -Q571 -0.0339932780839067 A542 -V559 -0.0343426835325804 Q544 -T575 -0.0350846865017034 A535 -W553 -0.036591707341378 Q571 -A576 -0.0373004580172789 L539 -A551 -0.0378741997354231 N555 -E568 -0.038238656803986 F566 -T575 -0.0386325996376522 E536 -M554 -0.038696528526041 L539 -Q560 -0.0394949854311628 A542 -T575 -0.0401202888985808 E536 -A551 -0.0402502737397897 V543 -Q571 -0.0407252953663853 D548 -Y573 -0.0428088696319306 E536 -N561 -0.0434304993033978 V543 -V559 -0.0434874483437352 V543 -A576 -0.0439241586829429 L541 -N555 -0.0459183470147888 A542 -N555 -0.0465925175329551 N561 -A576 -0.0476359370625281 W553 -Q560 -0.0477482533642088 E536 -N555 -0.0478289133159726 A550 -S572 -0.0488678503608373 E570 -T575 -0.0509153468810108 M554 -R574 -0.0524230187841255 S540 -Q546 -0.0525967838894514 L538 -A551 -0.0527186386098508 L538 -A552 -0.0538114224027524 S540 -A569 -0.0542086348319311 Q546 -A552 -0.0546851924067456 V543 -E568 -0.0549885872993978 S540 -I558 -0.055546670327602 L539 -Q571 -0.0562970334600297 V543 -A551 -0.0566801585859591 I558 -E570 -0.05679178062195 S540 -A576 -0.0574605661966192 Q544 -W553 -0.0576722711990345 L563 -Y573 -0.057893016169249 I558 -L563 -0.0580007819432566 E537 -W553 -0.0580667871868634 F549 -N555 -0.0594428111035568 A535 -L563 -0.0595456305609243 A552 -V559 -0.0596155911356622 V543 -S572 -0.0610479396090859 S540 -M554 -0.0621265298764881 S562 -E570 -0.0628653754356914 D548 -T575 -0.0637516052590618 G557 -R565 -0.0640686942050097 S540 -Y573 -0.0653798079100325 I545 -A550 -0.0656872782142459 S562 -E567 -0.0660341547166641 F566 -S572 -0.0661142317176111 P547 -Q571 -0.0782905049886371 D548 -R574 -0.0786898687144957 W553 -A569 -0.080207112193621 M554 -L563 -0.0834346731672402 N561 -T575 -0.0835838243929947 F549 -S572 -0.0851167365639753 L538 -F549 -0.0856028010153271 E536 -L563 -0.0870746919629308 D548 -L556 -0.0873622097332944 Q544 -A576 -0.0876472429836364 E537 -V559 -0.0880720028392563 A552 -E570 -0.0895500208367594 E537 -A551 -0.0898454228513597 G557 -R574 -0.0900498321991875 L563 -S572 -0.0900744532343438 A550 -E570 -0.0901863429159762 A551 -Q560 -0.0903393468694351 L539 -S562 -0.0905184992584163 A552 -E568 -0.0925225502867033 I545 -L556 -0.0929294526727897 Q546 -W553 -0.0935001097201957 I558 -E568 -0.095047704542337 E567 -S572 -0.0958740760025849 I545 -N555 -0.0966140606989638 A535 -Q544 -0.100989102619257 S540 -W553 -0.104364464036745 V543 -G557 -0.106109216467257 L539 -T575 -0.106931970640425 L541 -G557 -0.107056094473768 M554 -N561 -0.108639913392699 V559 -K564 -0.11052815112243 L541 -V559 -0.110752335048905 P547 -L556 -0.111614210917181 E536 -L556 -0.111812467855048 Q544 -N555 -0.11189830270412 E536 -S572 -0.113369100765655 A552 -Y573 -0.114013090591223 N555 -S572 -0.114437253518705 A542 -W553 -0.116999111204589 E537 -A552 -0.118008197837456 Q560 -S572 -0.119357004751636 E536 -L541 -0.121201754072699 D548 -N555 -0.123048820542065 Q546 -N555 -0.12339606238587 E536 -G557 -0.124323579009795 A535 -L556 -0.125560353375706 Q544 -M554 -0.125885269643777 A551 -I558 -0.129213319966384 V543 -I558 -0.130254811038147 L539 -E568 -0.130709828299622 K564 -Y573 -0.133464308834213 W553 -Q571 -0.134135714511859 A552 -T575 -0.136413158267109 E536 -I545 -0.136745910363463 E536 -A542 -0.140088567195954 P547 -A576 -0.140090225304074 D548 -W553 -0.140203731167756 E570 -A576 -0.141904638673183 A535 -A542 -0.142419119744928 W553 -R565 -0.143635988842119 N555 -K564 -0.146068831880033 K564 -E570 -0.146803114139217 M554 -A569 -0.149237509977134 G557 -E567 -0.150471215341814 L539 -F549 -0.150896794170539 M554 -R565 -0.151033563009626 E536 -V543 -0.152033136358129 W553 -E570 -0.152887486167125 M554 -S562 -0.153025705042944 F549 -Y573 -0.154064432427925 L539 -N561 -0.157723953250887 Q546 -M554 -0.159711775255184 W553 -E568 -0.160282492116332 E536 -W553 -0.16084575195875 E536 -A552 -0.163646926973629 L556 -F566 -0.16438925475679 E537 -L563 -0.164950794576974 L538 -A550 -0.16556601390562 A551 -T575 -0.169154818927962 A535 -I558 -0.171772076731775 A535 -N555 -0.172365501873809 L556 -T575 -0.172367283818391 A542 -A550 -0.172687999118874 I558 -Q571 -0.175351334288435 E536 -R565 -0.175895012003207 S540 -F549 -0.179442610216347 F566 -Y573 -0.180179102329663 L556 -E570 -0.180733028231547 A550 -R574 -0.182139908779802 V543 -N555 -0.182923122748028 I558 -E567 -0.185570461557814 S540 -N555 -0.186266572641031 L541 -L556 -0.186507861291388 E536 -Q560 -0.18948658828752 N555 -A576 -0.189540906656168 M554 -E567 -0.191033903555251 A569 -A576 -0.191900328840667 L556 -L563 -0.192132046008762 E536 -I558 -0.193297908878175 G557 -T575 -0.19618266332996 A551 -S572 -0.197420279330393 G557 -Y573 -0.198784758812826 E567 -Y573 -0.200825935590837 A551 -L556 -0.201114931721207 N561 -S572 -0.201750525986867 N561 -E567 -0.204078322505592 S540 -I545 -0.205045938889938 A542 -A551 -0.206169366507868 I558 -S572 -0.207156267194501 W553 -I558 -0.209763548809111 G557 -S562 -0.212545836113209 W553 -S572 -0.212708300196355 L539 -Q546 -0.218043442478233 A551 -Y573 -0.219515078203012 A569 -T575 -0.221804402180054 Q544 -A552 -0.223270291753819 G557 -L563 -0.224314156070818 N555 -A569 -0.225942509570894 W553 -V559 -0.226711517879266 N561 -E570 -0.228891937179792 G557 -F566 -0.231710628026667 I545 -A552 -0.232366075364382 A550 -N555 -0.233078566233724 A542 -D548 -0.233990418299144 D548 -M554 -0.240451532916508 V543 -M554 -0.241848305085184 L556 -S562 -0.243599382101462 Q560 -E570 -0.246042436133299 L539 -G557 -0.248039687826645 G557 -A576 -0.252464923064489 A535 -L541 -0.252929085737723 L538 -N555 -0.255122122246081 L556 -A576 -0.255941249748332 A550 -L556 -0.267022384533957 A551 -G557 -0.272490728629315 L538 -I545 -0.273193369708382 L539 -I558 -0.274201442635061 M554 -V559 -0.27697280819272 V559 -R574 -0.278602605009989 N561 -F566 -0.285169084092434 E537 -P547 -0.287073238292407 L556 -Q571 -0.287674209320134 V543 -R574 -0.288425274532603 M554 -Q560 -0.289720923600046 Q560 -E567 -0.296485782811377 A550 -Y573 -0.303135412646387 A542 -L556 -0.309388965228272 M554 -Q571 -0.32286648673928 S540 -P547 -0.324642187890405 V559 -S572 -0.326059087127669 A552 -I558 -0.338139025037899 Q560 -Q571 -0.340092903187213 E537 -V543 -0.343495646824088 N561 -A569 -0.362713742698683 P547 -W553 -0.372812355473362 L539 -I545 -0.373269466454534 V559 -F566 -0.373472741123872 M554 -Y573 -0.384662171061431 S562 -A569 -0.39685750443628 P547 -A552 -0.415479588601174 Q560 -Y573 -0.422700112193831 F566 -Q571 -0.425949901116182 Q560 -E568 -0.431058477557792 L538 -V543 -0.431424643520749 V543 -A550 -0.465385417332423 F549 -T575 -0.467203226435995 A552 -G557 -0.475953578326902 L541 -P547 -0.491651833145007 A535 -S540 -0.497940420282758 N561 -Y573 -0.502065685834725 L538 -Q544 -0.506557383588444 G557 -S572 -0.598674096671563 G557 -A569 -0.745370303729068 Q560 -R565 -1.02615540089363