[Fri Aug 26 17:58:20 2016] >Input file: TMQ8BGX3S8D.pdb >TM segments: D48-59 MAIDEN score = -0.1228 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R48D-D53D 0.178423153347218 S49D-C54D 0.134546302797343 D53D-L59D 0.0451303965180303 D53D-G58D -0.0223140570913143 V52D-L57D -0.0868526287582636 V52D-L59D -0.0938845789394502 C54D-L59D -0.277823401362265