[Mon Aug 29 17:54:31 2016] >Input file: TMQ8BZ81M3G.pdb >TM segments: 52-81 MAIDEN score = 0.4612 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L52 -N71 1.00046045560467 Q53 -L73 0.868812928369985 L52 -L73 0.672320049251561 P56 -Q80 0.615775785621697 Q53 -N71 0.51209825939164 Q53 -K77 0.453949604892883 E54 -L76 0.43710712162571 I55 -Q80 0.335440734746617 P56 -Y78 0.296266895260802 I55 -L76 0.230540181712042 S58 -S67 0.220300426894188 S60 -G65 0.219036180182527 I55 -L73 0.211040031149298 L66 -N71 0.205081387522082 P56 -L73 0.204963668255989 S57 -Q80 0.201229473728421 P56 -G62 0.180761063636249 P56 -S72 0.173995290944831 I55 -L68 0.172147261190984 P56 -R69 0.172050622374987 S57 -L68 0.170530579241975 K75 -F81 0.169748906556189 E54 -K77 0.167265608046399 E54 -Y70 0.164214952951471 S57 -Y78 0.14972441655597 E54 -Y78 0.139662741258078 I55 -K77 0.138476884414016 S67 -F81 0.134371114982197 Q53 -Q74 0.133686745174195 L52 -I59 0.131206419676917 P56 -N79 0.130128610924402 S58 -C63 0.123313850456605 Q74 -F81 0.120055389383911 A61 -S67 0.118376374586754 Q53 -S67 0.116147229630299 E54 -L68 0.115332653682449 L73 -Y78 0.115170935208149 L66 -L76 0.110939707678517 S57 -S67 0.103624434108497 I55 -G65 0.101057673034133 G65 -F81 0.100717808189283 E54 -S72 0.10008226220933 Q53 -S58 0.098158406655612 P56 -L76 0.0962725778097067 L66 -L73 0.0952819761386987 E54 -I59 0.092181894712323 E54 -R69 0.0917490005563384 L52 -L66 0.0905568608192193 I55 -K75 0.0870570690976953 L52 -S57 0.0867570650292677 R69 -L76 0.0845999995218616 L52 -S67 0.084463264613837 S57 -N79 0.0826119132422019 P56 -Y70 0.0822133189440466 I59 -S67 0.0795467145367157 P56 -Q74 0.0789115087969883 S67 -Q80 0.0788613841983636 R69 -K75 0.0747659567593617 S57 -L76 0.074418558087888 P56 -L64 0.0742880827979764 L66 -Q80 0.0731412858847706 Q53 -K75 0.0713954977173611 P56 -N71 0.0713770500921935 L68 -K75 0.0707939022844464 E54 -F81 0.0639962816540709 S72 -K77 0.0609532545983562 G62 -S67 0.0583643794783715 E54 -L66 0.0560547085550214 S60 -S67 0.0549225857866715 Q53 -F81 0.0529790818770923 S58 -L66 0.049274563930146 Q74 -Q80 0.0450635562623503 A61 -Q80 0.0434422634315208 S57 -L66 0.0422133002924223 A61 -L66 0.0412775740313576 L73 -Q80 0.0402106667224817 P56 -G65 0.0395668918399683 S57 -G62 0.0364299369664033 G62 -Q80 0.0362473967514063 S67 -L73 0.035350459493166 S57 -K77 0.0284654394498016 P56 -A61 0.0253270197276558 C63 -F81 0.0207555730907303 L68 -F81 0.0207546857590386 S60 -Q80 0.0204045330452312 S57 -C63 0.0177829824434959 S67 -S72 0.0150662370962324 L52 -S58 0.012667415173869 P56 -K77 0.00518250120824604 C63 -L68 -0.000646125955279686 S60 -L68 -0.000806715402513081 L68 -Q80 -0.00145254821104057 S57 -L64 -0.00211026110886947 I55 -F81 -0.00232285517336983 Y70 -K75 -0.00242188972696189 G65 -Q80 -0.00478973000465377 S57 -G65 -0.0051143692990232 A61 -N79 -0.00700563047578517 E54 -N79 -0.0070747509874427 S58 -G65 -0.00986816124663203 I55 -A61 -0.01175003326385 L52 -L76 -0.0166380295497426 I59 -L66 -0.0170703715487623 R69 -Q74 -0.0188623070852323 L73 -F81 -0.020775767417101 S58 -N79 -0.0272854886744569 N71 -L76 -0.0277961145179244 L52 -Y70 -0.038190399272831 G62 -F81 -0.0389944629185499 Q74 -N79 -0.0431018538249397 P56 -C63 -0.0453338164746624 I55 -C63 -0.0490181762844264 L52 -Q80 -0.0506942456274708 L66 -K77 -0.0516954928528679 I55 -R69 -0.0528578317254618 A61 -F81 -0.0632988768010706 I59 -G65 -0.0674451786221084 S60 -F81 -0.0720089696044939 Q53 -R69 -0.0739965456948531 S58 -Q80 -0.0763393760941559 S57 -K75 -0.0776624784959328 I55 -Y70 -0.0776803300302644 S58 -L64 -0.0782400154540781 I55 -S60 -0.0807209426503599 E54 -N71 -0.0816209543313038 Y70 -L76 -0.0831679187668675 L66 -Y78 -0.0897141503204679 L73 -N79 -0.0906566450512747 I59 -L64 -0.0924410281483272 E54 -K75 -0.0970833412918446 S67 -L76 -0.101367872375455 Q53 -Q80 -0.110727313037383 I59 -N79 -0.110966369922224 E54 -S67 -0.11342025187484 K75 -Q80 -0.114168136704873 L68 -Q74 -0.130762468434363 S57 -L73 -0.135385676094365 I59 -L68 -0.136915290047653 L52 -K75 -0.137884824652623 S58 -F81 -0.140040855888814 I55 -N71 -0.140283291774905 P56 -K75 -0.142447489408993 L52 -S72 -0.146829254262377 L68 -L76 -0.147603222860443 S58 -L68 -0.149743950332434 L64 -F81 -0.152251131080617 L68 -K77 -0.159219578748701 I55 -S67 -0.164927197912638 Q53 -Y70 -0.165537048099381 S60 -L66 -0.167967384589625 L66 -F81 -0.182053111948593 I59 -F81 -0.182702085143956 C63 -Q80 -0.182809894776191 L76 -F81 -0.205920073559799 I59 -Q80 -0.21982116991467 Q53 -L68 -0.228021992623723 I55 -Q74 -0.230154411667288 L52 -K77 -0.233209724000835 I55 -Y78 -0.243588235854282 I55 -S72 -0.252421829493821 P56 -F81 -0.253296859502373 E54 -Q80 -0.253821987631409 L52 -R69 -0.256742566831512 S57 -F81 -0.269626438734783 P56 -S67 -0.275093070796527 Q53 -L76 -0.286875459236665 I55 -N79 -0.300935131224464 E54 -Q74 -0.303619781116135 I55 -L66 -0.33692633321129 E54 -L73 -0.386049213793391 L52 -L68 -0.387566312963537 L68 -L73 -0.416677529125521 P56 -L68 -0.431425445320395 L52 -Q74 -0.517444130611744 P56 -L66 -0.536163904791645 Q53 -S72 -0.620954082748929