[Mon Aug 29 17:59:32 2016] >Input file: TMQ8CHQ6M1G.pdb >TM segments: 56-69 MAIDEN score = -0.0007 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T56 -E62 0.415984443642274 T56 -A66 0.154297621679474 T56 -G61 0.111299382175071 S57 -A66 0.110968875355811 S57 -L65 0.0665238372208323 R59 -L65 0.0652902930666908 R59 -R64 0.0585655396566894 S58 -L65 0.0266427981220282 S58 -W63 0.0151731823535433 S60 -L65 -0.0018453276440511 S57 -R64 -0.0391875829093089 S57 -E62 -0.0478516316845748 S58 -R64 -0.0935678667646135 T56 -W63 -0.165487157346111 T56 -R64 -0.19828822738429 S57 -W63 -0.211319620156265 T56 -L65 -0.267867142408431