[Fri Aug 26 18:18:56 2016] >Input file: TMQ8D017M1D.pdb >TM segments: 260-278 MAIDEN score = -2.2359 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L265 -A270 0.502016748547173 S268 -H275 0.397344150146472 A264 -A270 0.239096628459759 K267 -H275 0.136984030135785 D266 -G273 0.128344403842347 V263 -A270 0.12275913888888 Q269 -L277 0.117706040046899 K267 -A272 0.0793786417022666 D266 -A272 0.0763162822921588 L265 -A272 0.070467086739999 K267 -S276 0.0539598494722644 A264 -Q269 0.0538390097177841 L265 -G273 0.0340954441770971 D266 -H275 0.0185357710318259 S268 -S276 0.0113352873036627 V263 -Q269 0.00456892702572387 Q269 -L278 -0.024086048065235 A264 -T271 -0.0266173077555754 L265 -I274 -0.107544410507868 A270 -L278 -0.107683235815168 D266 -T271 -0.128494225337794 Q269 -H275 -0.131725353140084 S268 -G273 -0.132776604577055 K267 -G273 -0.153529944133778 D266 -I274 -0.165001273318072 Q269 -S276 -0.165410334588222 T271 -L278 -0.165959804111296 T271 -S276 -0.168094874565857 S268 -I274 -0.172050596957925 A272 -L278 -0.173885992953434 A270 -L277 -0.176487828306086 A270 -S276 -0.209659389145513 T271 -L277 -0.225358841225646 A272 -L277 -0.232628920137135 L265 -T271 -0.250401497604821 K267 -I274 -0.268698201205378 Q269 -I274 -0.278608073759136 G273 -L278 -0.366771558734456 A270 -H275 -0.451174257787769