[Mon Aug 29 18:02:42 2016] >Input file: TMQ8DSZ6M1G.pdb >TM segments: 436-464_ 492-512 MAIDEN score = -3.9075 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K498 -K503 1.1686530338832 A444 -E502 0.863917786645247 I445 -E502 0.854819001174635 T452 -Y494 0.777658198574688 L448 -V497 0.739810177644237 L448 -I493 0.717106395180734 Q437 -L505 0.704605223605054 L448 -K498 0.664895707074932 Y494 -A499 0.534314034310526 Q441 -N509 0.495856397300771 H454 -N459 0.479213994963121 Q450 -K498 0.45521881504568 Q441 -K498 0.455198929258722 K496 -K503 0.43693388600437 Q455 -K463 0.429843740586326 K503 -K510 0.42903549749498 H454 -S462 0.395893114488973 H446 -H454 0.38984292087407 K495 -E502 0.384074358667702 Q437 -I508 0.377399194525381 K442 -Q450 0.377081214862879 T443 -E502 0.372725786799498 Q441 -H446 0.347760609113758 K503 -I508 0.343562754219213 G449 -E502 0.341477520526495 Q455 -H460 0.333636184232028 S447 -K496 0.33359580191731 S453 -K498 0.333587408257942 S453 -H460 0.325059564466422 K496 -V501 0.322218213206974 Q437 -E502 0.321452619331974 V497 -E502 0.317061758780013 Q441 -A506 0.304582018563872 K436 -K442 0.292581136262202 L505 -K510 0.286161814922687 Q455 -K495 0.277908620964214 N459 -E492 0.274730560260319 S447 -Q455 0.256691023628911 S500 -L505 0.254316263916266 Q438 -E502 0.237892394296991 T443 -L505 0.237596594134893 K436 -A506 0.237379155628073 K503 -Q511 0.237281585240463 E492 -V497 0.235601977427889 L448 -Y494 0.232530161385285 K498 -K504 0.231253696796344 K442 -N509 0.229552642725789 K495 -K503 0.226893079504633 S447 -S500 0.225649827688437 A444 -K496 0.224607637464569 K504 -K510 0.212674650629889 Q437 -K504 0.207012153095457 Q441 -G449 0.206203544187877 I445 -T507 0.203011458855348 Q441 -Q450 0.202208023358939 H454 -K495 0.199333083933956 G449 -I493 0.186183895813917 S500 -N509 0.180101589192033 Q437 -K503 0.173045256383768 A499 -K504 0.171604116540072 S453 -S462 0.170675742221992 T443 -K498 0.164566527578603 T452 -A499 0.162197037719253 H446 -S453 0.156558026456621 K504 -Q511 0.148179568685649 I440 -L505 0.146417569398658 T439 -T507 0.141633476685202 T456 -T464 0.140430536287867 Q438 -I512 0.134996233270257 K504 -N509 0.1339760375312 S451 -N459 0.131884977386041 K442 -T507 0.131287386725691 T443 -T452 0.128630008882947 T439 -I512 0.126824873391826 A444 -N509 0.126558837188646 K442 -K510 0.125520755045689 I445 -K498 0.123365774428461 T439 -K510 0.122391430330936 A444 -Y494 0.120232018021853 Q450 -S458 0.115499175884344 G449 -E492 0.114921858740574 Q437 -K442 0.113574477741994 K498 -T507 0.112755237138528 K436 -Q441 0.111291967520147 Q438 -K504 0.110355707563001 V457 -T464 0.110030698060562 I440 -K510 0.108225136622206 G449 -A499 0.106732921682359 S447 -V501 0.10519866484011 Q455 -V497 0.105054421139682 T439 -V501 0.104910146001516 K496 -L505 0.10399310075133 A444 -A499 0.10164246538247 S453 -E492 0.100895653255886 H446 -E502 0.0984652124834336 I440 -V501 0.0973149583934916 I440 -K503 0.095050578612438 S451 -S500 0.0927668009380698 H454 -Y494 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