[Fri Aug 26 18:27:26 2016]
>Input file: TMQ8IUR5M1D.pdb
>TM segments:  537-561

MAIDEN score = 41.8684

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
P545 -S560 		10
Q542 -L551 		10
Q546 -N553 		10
P545 -K559 		1.38382923153524
H544 -R549 		1.34028935122716
L551 -K559 		1.12805186045383
H544 -N553 		1.06104794518395
H544 -F552 		1.06001304458757
F552 -K559 		0.991411874013369
Q546 -L558 		0.975295807323807
L543 -L551 		0.880571305541618
P545 -A550 		0.844496040018243
L541 -L551 		0.742494679983117
Q546 -L554 		0.726260377610854
Q546 -F552 		0.682576151189087
Q542 -F552 		0.68170161347956
P545 -L558 		0.676141181992569
R549 -L554 		0.586019558248185
L543 -A550 		0.552495235144152
P545 -L554 		0.523329628758562
L543 -S560 		0.510986881842861
N553 -L558 		0.488144249731265
A540 -L551 		0.40486788706744
H547 -F552 		0.372572960938754
Q546 -K559 		0.364414539188288
N553 -K559 		0.358694564816318
H544 -L551 		0.342321861614906
Q542 -K559 		0.33718953994326
P545 -F552 		0.318523474379298
A550 -G555 		0.283547574648414
A540 -K559 		0.266992944285741
H547 -L558 		0.260263551967707
H544 -Q561 		0.225616932093105
Q542 -N553 		0.212687044586202
N548 -N553 		0.205289802180718
P545 -N556 		0.185151939328978
N548 -G555 		0.183554117494737
Q542 -G555 		0.180183272031488
Q542 -R549 		0.174608482131763
Q538 -R549 		0.168398571809282
R549 -K559 		0.160540595187281
F552 -Q561 		0.160357459138113
P545 -Q561 		0.144286286096743
P545 -L551 		0.141108786705491
R549 -Q561 		0.122730077377612
Q546 -L551 		0.12039887994609
A540 -N553 		0.117928406125623
R549 -G555 		0.109462742670512
L541 -H547 		0.10927152843176
A540 -A550 		0.0980461492747977
L541 -R549 		0.0912269356703153
A550 -L558 		0.0911073663985347
Q542 -A550 		0.0909974742032711
R549 -L557 		0.0852544792182371
L551 -L557 		0.0808435871071458
R539 -N548 		0.0802032270104389
R549 -S560 		0.0742732377806441
L543 -Q561 		0.0742487420146016
L551 -N556 		0.0734932222329276
H544 -G555 		0.0597523506182851
L554 -Q561 		0.0587977840811682
Q542 -N548 		0.0516286515311188
A550 -Q561 		0.0511569898169859
L543 -G555 		0.0499716711029623
H544 -L557 		0.0456806918367744
L554 -K559 		0.0433012063254989
N548 -K559 		0.0409629010488199
A550 -L557 		0.0403289426932312
Q538 -A550 		0.0391448143128148
L541 -A550 		0.0370200910489147
H547 -G555 		0.0331659538886377
N548 -S560 		0.0327937113044354
R549 -N556 		0.0312004614883659
Q546 -Q561 		0.0287162945606765
H547 -N553 		0.027503859582116
L543 -L557 		0.018769028339638
H547 -Q561 		0.0166337185511693
A540 -Q561 		0.0128886632911982
N553 -Q561 		0.00335343765590812
L541 -L558 		0.00281590445776381
A540 -H547 		-0.000126560697373157
G555 -Q561 		-0.00650699937926547
L551 -Q561 		-0.00829913960897821
A540 -S560 		-0.00846915878027854
Q542 -L558 		-0.0112904837787955
Q542 -L557 		-0.0195261003568206
Q538 -L551 		-0.0305900105126575
L543 -N548 		-0.0331136255510384
A540 -P545 		-0.0361145258607776
Q546 -L557 		-0.0391948539700318
L541 -N553 		-0.0406654556312872
A540 -Q546 		-0.0420401730595201
H547 -S560 		-0.0444694549158151
R539 -R549 		-0.0464299478809042
L543 -L558 		-0.0490164748425528
Y537 -A550 		-0.0561302914247972
Q546 -S560 		-0.0581101573929599
R549 -L558 		-0.0621663888793309
Q542 -H547 		-0.0681376262242863
Y537 -Q542 		-0.0683631520086724
H547 -L557 		-0.0693470889004528
H544 -L554 		-0.0701949746356663
A550 -K559 		-0.0745694887781947
A540 -N548 		-0.0768872405121601
Q546 -N556 		-0.0770174236664276
G555 -S560 		-0.0842980485620162
F552 -S560 		-0.0876666570591003
Q542 -L554 		-0.0902932901634461
L543 -R549 		-0.0915901526677612
Q542 -Q561 		-0.0957530753487834
Q538 -L543 		-0.0958741802152248
F552 -L558 		-0.0991918678623502
R539 -H544 		-0.110100600781637
L543 -N553 		-0.115908996296691
F552 -L557 		-0.120088534368475
L543 -N556 		-0.125185558727904
L541 -Q546 		-0.132345905551233
R539 -F552 		-0.136934957067951
Q538 -N548 		-0.139036142204251
L543 -L554 		-0.139505151907739
L541 -Q561 		-0.145696101189621
Q542 -S560 		-0.147075515155165
L541 -L554 		-0.149824966920558
R539 -L551 		-0.151599297419011
Q546 -G555 		-0.157318550326199
A540 -F552 		-0.158542945003711
N548 -L558 		-0.1595896575831
L541 -N548 		-0.16515415211876
R539 -A550 		-0.170470137772208
N548 -Q561 		-0.171323371338445
L543 -K559 		-0.174334622684922
H544 -N556 		-0.181044191261468
L541 -F552 		-0.183267659522681
N548 -L554 		-0.183506546097454
L541 -S560 		-0.18383257926561
H544 -A550 		-0.184225399021379
L551 -L558 		-0.187319952965897
A540 -R549 		-0.209566204718342
L554 -S560 		-0.224865606265109
A550 -S560 		-0.227750141764587
L541 -K559 		-0.239375496162004
H547 -K559 		-0.242639823090419
P545 -G555 		-0.25015804363884
L543 -F552 		-0.284678778201014
H544 -L558 		-0.29416144477891
L551 -S560 		-0.310839846157181
N553 -S560 		-0.317114761796106
H547 -L554 		-0.334242136296471
Q538 -H544 		-0.449792432617527
P545 -N553 		-0.512410715476612
P545 -L557 		-0.568720602674301
H544 -S560 		-0.677561200525519
H544 -K559 		-0.804406723282459