[Fri Aug 26 18:28:20 2016] >Input file: TMQ8IUR5S2D.pdb >TM segments: A837-853 MAIDEN score = -2.4317 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R848A-V853A 0.46160673262589 Y846A-Q851A 0.291799644067364 K838A-Y846A 0.221437183673016 S841A-A849A 0.203330531441421 S841A-Y846A 0.182670344581794 G837A-Y845A 0.17053309032899 Y839A-Y846A 0.157318436981268 Y839A-Y845A 0.136320000311191 Y839A-E847A 0.122439029790043 Y845A-L852A 0.10471011687869 G837A-A844A 0.101210897839712 A844A-V853A 0.100306832609141 S841A-R848A 0.0929130929313184 V840A-E847A 0.0864757684349424 A842A-E847A 0.0687898631673276 A844A-L852A 0.0359269039870556 V840A-R848A 0.0168885166416843 A844A-Q851A 0.0132711450678702 R843A-R848A 0.00560102760214462 S841A-E847A 0.00549526127450911 Y839A-R848A 0.00209008913311809 V840A-A849A 0.000175922939916973 G837A-Y846A -0.0205972766278268 G837A-R843A -0.0208531832817016 K838A-E847A -0.0222794307948035 E847A-L852A -0.0457388235773291 Y839A-A849A -0.0639193083817089 R843A-Q851A -0.0647694484214667 Y845A-V853A -0.0810889868174898 A842A-L850A -0.0824348292486672 A842A-Q851A -0.0901435438608336 R843A-L852A -0.0944746842708621 K838A-R843A -0.0967675084479342 V840A-Y845A -0.100669588163963 Y845A-L850A -0.115151299209536 K838A-A844A -0.126088381040613 K838A-Y845A -0.135207896738509 A844A-A849A -0.166750795604759 E847A-V853A -0.167562003422288 R843A-A849A -0.174021913188799 S841A-L850A -0.189623079566894 A842A-A849A -0.193172359202382 Y846A-L852A -0.207142999208136 R843A-V853A -0.219113206627545 R843A-L850A -0.229401546067141 A844A-L850A -0.233577554028947 A842A-R848A -0.250121550328312 Y839A-A844A -0.270664519051564 G837A-A842A -0.345495977998167 V840A-Y846A -0.365219389521402 Y846A-V853A -0.377600228987311 Y845A-Q851A -0.463392324697455