[Fri Aug 26 18:33:18 2016] >Input file: TMQ8JZM4S3D.pdb >TM segments: A389-398 MAIDEN score = -0.1764 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S391A-C396A 0.0979393288360357 K392A-V397A 0.023520173399536 S391A-V397A 0.0225714555542078 K392A-L398A -0.0507464613687496 I393A-L398A -0.0518829073827178 C389A-D394A -0.217765540580781