[Fri Aug 26 18:35:02 2016] >Input file: TMQ8K099S8D.pdb >TM segments: B446-452_B454-464 MAIDEN score = -0.0515 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K450B-N456B 0.681371702484696 A451B-A459B 0.336593595260043 K450B-S461B 0.318571734603421 W449B-T457B 0.274387508935779 W449B-T458B 0.265400692184303 W449B-G455B 0.260329262330776 S446B-Y464B 0.249894350746335 G455B-F460B 0.174894006080784 V448B-F460B 0.152658088457797 S446B-V462B 0.14547958301993 N456B-S461B 0.127104378275143 P452B-T458B 0.123862408319525 A454B-A459B 0.111402126467584 S446B-S461B 0.108730057743646 V448B-T457B 0.100454360497722 A451B-S461B 0.0837723701051853 W449B-A459B 0.0717543425148084 K450B-V462B 0.0663634430988052 P452B-A459B 0.0660432096214292 W449B-N456B 0.0608216256429479 P452B-F460B 0.0554904517516261 K450B-T457B 0.0485967367175775 W449B-V462B 0.0452917741526448 L447B-S461B 0.0431548408534557 K450B-T458B 0.0425032568983665 V448B-S461B 0.0342890508211267 V448B-G455B 0.0333327162459476 S446B-L463B 0.0319992500818558 V448B-A454B 0.0153200373141029 N456B-V462B 0.00356847080572753 V448B-Y464B -0.014478649953185 K450B-A459B -0.0194269429764504 V448B-A459B -0.0251056882372893 G455B-S461B -0.0261234884774546 A451B-V462B -0.0275588629677923 W449B-Y464B -0.036707491280214 A454B-F460B -0.0512689704415648 A451B-F460B -0.0693435670928253 V448B-N456B -0.0828173814038576 A451B-T457B -0.103841383383573 L447B-Y464B -0.110341417735383 W449B-S461B -0.122321513795354 L447B-F460B -0.133408979466322 W449B-A454B -0.163693767146641 A451B-T458B -0.198953737875225 K450B-G455B -0.206413707836978 L447B-V462B -0.224832457132663 K450B-F460B -0.226277879967206 V448B-L463B -0.227562157213663 P452B-T457B -0.231599910205051 W449B-L463B -0.306430325196079 W449B-F460B -0.311133334638033 V448B-V462B -0.344678716559361 L447B-L463B -0.455005803736015 A451B-N456B -0.465597422471847