[Fri Aug 26 16:26:15 2016] >Input file: TMQ8K377S1D.pdb >TM segments: B77-88 MAIDEN score = -0.9611 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L80B-F85B 0.224886224138407 S78B-Q84B 0.173919053446557 L80B-L88B 0.0926507518181743 R81B-L88B 0.0765869400181471 E79B-F85B 0.0325245325034331 S78B-G83B 0.00834577495757838 L77B-A82B -0.00501448923989134 L77B-Q84B -0.023478168911063 R81B-G87B -0.0239472809924162 L80B-G87B -0.0325670476028768 L77B-F85B -0.0752355806848097 S78B-F85B -0.079903988877194 L77B-G83B -0.105461425790543 L80B-T86B -0.111942278497006 E79B-Q84B -0.137696437985784 A82B-G87B -0.144330772618636 E79B-T86B -0.170729124824861 R81B-T86B -0.19377357678085 G83B-L88B -0.216735263116568 A82B-L88B -0.249179819703649