[Mon Aug 29 16:42:38 2016] >Input file: TMQ8L626S2G.pdb >TM segments: B442-462_B516-534 MAIDEN score = -4.5218 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I445B-W453B 0.857229205613964 I445B-P451B 0.414408610000685 I445B-I452B 0.375239159599567 P448B-W453B 0.326654036058215 V444B-W453B 0.301622207804587 T442B-W453B 0.285657133594707 N454B-E520B 0.268348542639056 P451B-E520B 0.256332934096839 Q450B-Q455B 0.239770259608868 G449B-I521B 0.222212103624737 G446B-W453B 0.203123592454222 P451B-L523B 0.185219800677281 N454B-L525B 0.16306253545824 S462B-Y527B 0.154569795529174 S462B-K528B 0.153076536705672 F459B-Y530B 0.132005076448921 G449B-A518B 0.115900257078422 P451B-G519B 0.104438565292364 W453B-R524B 0.101323888095003 L460B-Y530B 0.0988464492224665 D456B-L522B 0.0986990444107794 D456B-K528B 0.0985221619959891 Q450B-I521B 0.0975899257903139 P451B-A518B 0.0964902749397289 I445B-Q450B 0.0952649628598063 Q458B-Y530B 0.0938183742287197 I445B-N454B 0.0919378974082781 L460B-L525B 0.0891776812608693 V461B-Y530B 0.0888409762723641 P448B-A518B 0.0863931606999619 G449B-S517B 0.0812778724457988 Q455B-I521B 0.0800585772690126 V461B-L525B 0.074403743953776 G446B-N454B 0.0611255178680615 V444B-Q455B 0.0583854593633213 I452B-G519B 0.0572858526768192 F459B-L523B 0.0566214035169477 T443B-P448B 0.0540040684113752 N454B-I521B 0.0499967356531945 T443B-I452B 0.0477702057181233 Q450B-A518B 0.0445429277082652 F457B-K528B 0.0439927604870296 Q458B-S529B 0.0425522679949717 S462B-S529B 0.0413383670263157 W453B-E520B 0.0378512704315221 V444B-I521B 0.0319641290118575 S462B-Y530B 0.0282498161927867 G449B-G516B 0.0272702890048611 T443B-D456B 0.0264026808851634 T443B-F457B 0.0212198693526373 L460B-V531B 0.0199644197343884 Q450B-L523B 0.017464687193586 V444B-N454B 0.0147153660864152 F459B-S529B 0.0142250156844144 N454B-L523B 0.0113723061817588 Q455B-R524B 0.00647153503674236 V444B-G449B 0.00623544644754581 A447B-I452B 0.0029008041947427 F459B-L525B 0.000474726120521574 G516B-I521B 0.000427187818380581 V444B-Q450B -0.00657877705711685 K528B-E534B -0.00696618979832242 K528B-E533B -0.00769275357046495 I452B-R524B -0.0085282167357037 T442B-A447B -0.0117858159924964 I452B-L522B -0.0128991426580658 Q458B-T526B -0.0179462266227036 Q455B-T526B -0.0196443531837425 P451B-D456B -0.019784141931356 I445B-Q455B -0.0237096919415702 V461B-T526B -0.0260380326074587 T442B-Q455B -0.0276448289180802 A447B-W453B -0.031272777963046 W453B-L523B -0.0326816700981123 G449B-L522B -0.0349191995334334 D456B-I521B -0.0366006472654999 D456B-Y527B -0.0434288807047503 T442B-I452B -0.0456798257163 Q455B-L522B -0.0488930386362125 P448B-G519B -0.0518940087741824 G446B-P451B -0.0531096906045971 I452B-E520B -0.0549093194671517 L460B-Y527B -0.0597884427880304 T442B-P451B -0.0619585300479131 Q458B-L523B -0.0684429980102941 S529B-E534B -0.0708111943086029 F459B-R524B -0.0714012883130151 Q458B-R524B -0.0726703978296888 I452B-L523B -0.0825097091774738 F457B-L523B -0.0840053588584637 L460B-T526B -0.0852238989418659 T443B-N454B -0.0885807467587787 P448B-I521B -0.0935610987946749 T443B-P451B -0.0944938028988016 Q455B-L525B -0.0953407368740695 F457B-R524B -0.0989715798589028 D456B-R524B -0.10401405146538 F457B-L522B -0.1146951054701 P448B-N454B -0.124389074012966 L460B-S529B -0.128884682303972 D456B-L525B -0.129804278498131 N454B-T526B -0.133540028289782 L460B-K528B -0.136282826701769 G449B-G519B -0.158325582081796 F459B-Y527B -0.1594578769719 I445B-I521B -0.162860345563325 Q450B-E520B -0.163257791494871 T443B-Q455B -0.166928939902831 N454B-R524B -0.167515556859068 F457B-Y527B -0.16832362976563 V461B-K528B -0.172565640994966 G449B-E520B -0.184617013347958 F459B-T526B -0.185528642904151 Q458B-K528B -0.187252276550808 P451B-I521B -0.193989177317689 F459B-K528B -0.196831848710914 D456B-L523B -0.199900535284152 D456B-T526B -0.210634852908929 N454B-L522B -0.221832324026249 Q450B-L522B -0.226245664876547 F457B-T526B -0.234433290348847 P451B-L522B -0.243297457542949 V461B-S529B -0.250301665353477 V461B-Y527B -0.252226103836647 V444B-P451B -0.255462700584403 F457B-L525B -0.262215725990229 T443B-W453B -0.276509022018365 V444B-D456B -0.278611210611057 P448B-E520B -0.284566211023107 W453B-I521B -0.287568673949093 G446B-I452B -0.297854594291206 W453B-L522B -0.324247383271862 Q450B-G519B -0.331495306304997 I452B-I521B -0.359495645462391 Q455B-L523B -0.428119555935496 Q458B-L525B -0.434898367001205 V444B-I452B -0.460053589800895 Q458B-Y527B -0.468700080940586