[Fri Aug 26 16:32:50 2016] >Input file: TMQ8MXQ3M1D.pdb >TM segments: 5-15_ 18-25_ 30-37_ 48-57 MAIDEN score = -3.1005 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- N21 -V54 2.35788548006 T6 -N30 0.915712582419822 L7 -N31 0.840074707416766 N49 -V54 0.695985840992664 R13 -N33 0.617538020494039 N23 -V54 0.609750554089685 S20 -R52 0.59165725967063 S20 -V50 0.421468272608181 K14 -N23 0.385761983388042 P5 -N25 0.37730441718293 P5 -N12 0.331680965225424 N9 -K14 0.32869414045487 N9 -N32 0.297903472620226 N35 -R57 0.297456460090172 S22 -R57 0.295604421312421 N35 -R52 0.287182316077573 N30 -R57 0.286207721998114 L7 -N12 0.277139788535682 N31 -R57 0.275730835667839 R13 -N25 0.275675229991079 S8 -K14 0.275589585984234 N21 -N55 0.273606695610044 P5 -N31 0.271225785268924 T10 -N33 0.267119178749774 S22 -N49 0.254439163791199 N12 -N32 0.240574244456636 S24 -N31 0.233865166592448 R11 -N32 0.22335481090483 L7 -N33 0.210443363858217 R52 -R57 0.210050073330663 N36 -R52 0.198045272682099 N12 -N31 0.194815332355271 R13 -N55 0.192184394780077 N15 -S22 0.189788032672277 K14 -R52 0.187343759874694 S8 -N23 0.185203756674956 R11 -N23 0.163207212540577 N19 -N53 0.149113193819461 N23 -N32 0.148987714201735 N25 -N34 0.148851397604138 N23 -N37 0.148011478873805 N32 -N56 0.148011333025864 N34 -N55 0.14795660894247 N15 -N51 0.147160395251026 N49 -N56 0.146744529625388 N51 -N56 0.144737899710998 N23 -N49 0.143554011851535 N30 -N56 0.142297461271517 N23 -R52 0.140354912673509 N48 -N55 0.139693052495751 N12 -N55 0.138532612387373 N15 -N33 0.137743189647482 N19 -N36 0.133205750526346 R13 -S24 0.13299578277153 S22 -V50 0.132032610877876 N18 -N55 0.131523239483424 L7 -N35 0.130616618260868 N21 -N53 0.129057610087061 T10 -N15 0.127427520603427 N23 -N30 0.126760660378891 N37 -N56 0.123567048253655 S20 -N48 0.121626968638955 N36 -N49 0.118739306076335 N25 -N35 0.112757604540724 N18 -N35 0.108219752160131 N31 -N36 0.106955699871588 N19 -N56 0.105290504554926 K14 -N33 0.104785029522093 N12 -R57 0.104533875788268 N36 -N53 0.103592915651441 N30 -N35 0.10290024381394 N18 -N23 0.0978002155826366 N21 -N34 0.0973010738902514 N19 -N35 0.0967352286194808 N21 -N49 0.0963591091540192 K14 -S20 0.0959333368590789 N15 -N35 0.0932063791028548 K14 -N21 0.0928133781883038 N12 -N21 0.0920111511781838 N35 -N53 0.091215826307538 K14 -N34 0.0885019783015761 T6 -S24 0.0859169374413522 N37 -N51 0.0854441111872832 K14 -S22 0.0836603991967393 N23 -N36 0.0803861210541853 T10 -N30 0.0802435116163838 N15 -N56 0.0795233780539351 S22 -N34 0.0775369955248824 N23 -N33 0.0767326627123071 N18 -N36 0.076189127125067 R11 -N25 0.0757780327708177 N33 -N56 0.0741342712378452 S22 -R52 0.0734771305608501 N25 -N30 0.0734104412940377 S20 -N56 0.0733576411015955 N23 -N55 0.0727465761721726 R13 -N34 0.070525816147172 N34 -V54 0.0702199695855851 V50 -N55 0.0699390631722481 N36 -N55 0.069756598182981 K14 -N19 0.0688617890983494 R13 -S22 0.0662309477970324 N37 -N55 0.0621967997449703 R13 -R52 0.0614315698172918 N23 -N34 0.0600798402924506 N31 -N56 0.0575751369314803 S22 -N37 0.0558141691945651 L7 -N30 0.0550692664422445 N25 -N33 0.0542751835927214 N12 -V54 0.0541234368110564 N15 -N49 0.0533298088032486 N36 -N56 0.0531534730650081 S8 -N25 0.0529244040588059 R11 -N30 0.0521443160156005 S8 -N35 0.0516464858671637 T6 -N34 0.050759956622084 N21 -R57 0.0487414100534522 N12 -N36 0.048614205064359 N9 -N36 0.0464550138377841 L7 -S24 0.0464198227561017 N37 -V50 0.0461393926868547 S24 -N35 0.0455409330874046 N25 -N56 0.0443700841025421 L7 -N32 0.0437089952994112 N49 -N55 0.0426100919208656 N15 -V50 0.040757803173292 N12 -S24 0.0398107883348895 N21 -N36 0.03885777065677 N15 -N53 0.0388400507886379 S22 -N36 0.0380472416337816 T10 -N37 0.0355062964980459 N35 -N55 0.0332976406614217 N9 -N35 0.0330727795931548 S22 -N51 0.0314476778832842 T6 -R11 0.030330297364068 N15 -N55 0.0292698127230626 N23 -N35 0.0288658479842812 N19 -N55 0.0252434520268969 N23 -N53 0.0240840237861942 N18 -N51 0.0238963920028551 R13 -N19 0.0231726905392415 N21 -N48 0.0227714083785395 N9 -N34 0.0225111754243636 N9 -N30 0.0224706337280181 P5 -N33 0.0223060721097532 T10 -N36 0.0210120347345339 N15 -N48 0.0205597917262959 T6 -N31 0.0204871078202196 N12 -N23 0.0201049985758712 N12 -N30 0.0192217274183408 S8 -R13 0.0184856258520738 S22 -N53 0.018429690560958 N21 -N37 0.0184207738939847 N37 -N53 0.0181268129627709 N23 -N31 0.0181094450047338 N34 -N56 0.0175989242216281 N12 -S22 0.0167386931192622 N15 -N34 0.0163678987102255 N37 -N48 0.0160937096667605 N15 -N36 0.015967212310728 S24 -N30 0.0155104371572035 N19 -N51 0.0147736094809719 N12 -N37 0.0147558158500846 S20 -N37 0.0147165075731234 S22 -N35 0.0144874475157352 N19 -N37 0.0138172649534467 N21 -N35 0.0132606908601918 N21 -N51 0.0132013430311555 N15 -N23 0.0131330793763504 T10 -N32 0.0122083891385545 N12 -N56 0.0118877746289791 N12 -N25 0.0115511385924178 N25 -N55 0.0115454635797796 N25 -N32 0.0114260465999636 N37 -N49 0.0113967946183154 S20 -N36 0.00638791385487991 P5 -S24 0.00342241580685609 R13 -N18 0.00202647244594667 S20 -N35 -6.18567953343252e-05 S22 -N48 -0.0050959919085749 N48 -N53 -0.00575875965258899 N25 -V54 -0.00666621761547281 S24 -N33 -0.00697247899018461 S8 -N36 -0.00911064564418873 S24 -N34 -0.0116437829301159 S24 -N32 -0.0138829974623289 N32 -R57 -0.0156339290178429 N25 -N31 -0.0199284503123085 R11 -N56 -0.0228740460806538 N33 -R57 -0.02318180263883 T6 -R13 -0.0248499996995901 K14 -S24 -0.0259189503563801 R13 -N53 -0.0314961330577115 N15 -N21 -0.0347707447349999 S24 -N53 -0.0348502668730183 R13 -N30 -0.0353519339420299 L7 -N34 -0.0363054997613749 N34 -R57 -0.0364712716808304 T6 -N25 -0.0369602843219221 R13 -R57 -0.0407589895784667 T6 -N23 -0.0468413247040482 S20 -R57 -0.0494889251347419 L7 -N23 -0.0564263937973539 T6 -N32 -0.0588155778435057 N21 -V50 -0.0618838034861202 R11 -N36 -0.0633943535944699 P5 -N23 -0.0650800701961396 K14 -N32 -0.0681291215938304 N48 -V54 -0.0722447174632102 R13 -S20 -0.0768526807105323 N18 -R52 -0.082461192078739 K14 -N53 -0.0828367254370677 N18 -V50 -0.0867229673789325 N19 -V50 -0.0924072682188015 P5 -R57 -0.0937560951937466 T10 -N35 -0.0979801836253002 V50 -N56 -0.100600028316397 R13 -N56 -0.102863257732758 K14 -N48 -0.107438346923258 S24 -N55 -0.112169635313495 P5 -R13 -0.112604057000427 T10 -N34 -0.113142937166467 K14 -N49 -0.120962519750928 S20 -N55 -0.123048336415658 S8 -N30 -0.126590527757106 T6 -N12 -0.129998612864749 N37 -V54 -0.131167380701348 L7 -N25 -0.132557609793259 R13 -N32 -0.134718039809881 P5 -N32 -0.139170408421464 R13 -N31 -0.141734080860316 R13 -V54 -0.14968614728491 N36 -V54 -0.150950809074187 N19 -V54 -0.154820005154334 N15 -V54 -0.159392733233348 K14 -N35 -0.162082803447798 K14 -N31 -0.163868601210231 R11 -N37 -0.168099511861875 N21 -N56 -0.17336577864427 N15 -R52 -0.174224632347901 K14 -N37 -0.17605802626571 L7 -R13 -0.1801972079663 R13 -N21 -0.183088456416919 K14 -N55 -0.183780259403383 R13 -N36 -0.184208846760988 T10 -N31 -0.187883103088163 T6 -N33 -0.194819212238366 N9 -N31 -0.201304732746743 N19 -N48 -0.205673264654678 N35 -V54 -0.213453131987212 N18 -N37 -0.216031557134835 K14 -V54 -0.216872728539565 R13 -N35 -0.219465667041467 R11 -N31 -0.224860724955917 N15 -S20 -0.224999774616045 S22 -V54 -0.225857619419971 S22 -N56 -0.227245670743731 S24 -N56 -0.229417769049818 K14 -N56 -0.230639009495426 L7 -K14 -0.237643849348282 N25 -R57 -0.237881714796838 R11 -V54 -0.244001390067285 N35 -N56 -0.253194116135934 S8 -N34 -0.260313576508199 N23 -R57 -0.264173101370755 S20 -N51 -0.265660388991129 N18 -N53 -0.2768555578691 N37 -R52 -0.294415260482316 R11 -N35 -0.303434272166451 N18 -V54 -0.318254959869397 S24 -V54 -0.327498483946459 R13 -N23 -0.353657154953357 N21 -R52 -0.36453239082525 N19 -R52 -0.382391352722231 S20 -V54 -0.384489632581797 R13 -N37 -0.387167966453398 K14 -N36 -0.390684407765766 R11 -N34 -0.394749813558241 S8 -N33 -0.451675208645459 S24 -R57 -0.461314983582317 S22 -N55 -0.49550189508236 S20 -N53 -0.5101736081431 S8 -N32 -0.514611904156895 S20 -N49 -0.519322229444099 P5 -N30 -0.525576600533787 S8 -N31 -0.596074079495227 N12 -N35 -0.597449474634084 R11 -N33 -0.634037364608146 N9 -N33 -0.662671175071349 N18 -N49 -0.771629918925172 N12 -N34 -0.799348869658146 N18 -N48 -0.880950093657321 N19 -N49 -0.885081814359527 N23 -N56 -0.913509180233163 N15 -N37 -0.925464082809219 N12 -N33 -0.938590479309074