[Fri Aug 26 16:33:05 2016] >Input file: TMQ8N0U2M1D.pdb >TM segments: 34-51 MAIDEN score = 0.1788 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C34 -E40 0.271690425961399 T44 -Q49 0.155468379083573 A36 -G41 0.0984123910976926 Q46 -A51 0.0971467792096505 A45 -L50 0.0548736415350428 A43 -G48 0.0376077566103783 C34 -S39 0.0316297203964027 G41 -Q46 -0.0138532605279829 S39 -T44 -0.0262738746702249 T44 -L50 -0.0365456942208064 D42 -P47 -0.0463286871807571 A43 -L50 -0.0539731381074509 A45 -A51 -0.0661233523292326 A43 -Q49 -0.0806756366288797 E40 -A45 -0.0945578565438689 F35 -E40 -0.149740463053989