[Mon Aug 29 16:50:12 2016] >Input file: TMQ8N2U0M1G.pdb >TM segments: 44-60 MAIDEN score = -1.3701 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L53 -V58 0.722324753778707 L50 -V58 0.548052004393708 H48 -H60 0.328009302430736 L50 -G57 0.299547907071857 S52 -V58 0.279714037402969 L55 -H60 0.24129340683954 H48 -G57 0.0963422349949248 S52 -H60 0.0919397541636844 H48 -V58 0.0878740036652657 H51 -V58 0.0637408550989051 F49 -H60 0.050431115037564 F49 -L55 0.0209744304910622 H47 -S52 0.0171648665564286 L53 -H60 0.0110864800875886 K46 -H51 0.0101524358384646 F49 -A54 0.00642586363856346 H51 -P59 0.00020524106013875 F49 -L56 -0.0195171038882789 F49 -V58 -0.0677204673199387 L50 -L55 -0.0723469325024162 A54 -H60 -0.0815678898825887 S52 -P59 -0.0891389849470015 F49 -G57 -0.11296086222758 F49 -P59 -0.114374448489863 L50 -P59 -0.130269978763631 A54 -P59 -0.170815539988739 L50 -L56 -0.188583560649002 H51 -L56 -0.195339822544137 L50 -H60 -0.219607383357054 H48 -L53 -0.248657450322295 H48 -P59 -0.270448789346284 L53 -P59 -0.303167604536648 H51 -G57 -0.552493747136451 S52 -G57 -0.621062718275704 H51 -H60 -0.787322941840743